Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   V6C62_RS01455 Genome accession   NZ_CP145249
Coordinates   314904..315569 (+) Length   221 a.a.
NCBI ID   WP_002436233.1    Uniprot ID   A0A0S4M7T5
Organism   Staphylococcus capitis subsp. urealyticus strain Sc1365666     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 309904..320569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6C62_RS01430 (V6C62_01435) - 309992..310618 (-) 627 WP_037550654.1 FMN-dependent NADH-azoreductase -
  V6C62_RS01435 (V6C62_01440) - 310890..310991 (+) 102 WP_016898541.1 SE2200 family small protein -
  V6C62_RS01440 (V6C62_01445) - 311175..312716 (+) 1542 WP_213667901.1 NAD(P)H-binding protein -
  V6C62_RS01445 (V6C62_01450) - 312910..314394 (-) 1485 WP_030059210.1 alkaline phosphatase -
  V6C62_RS01450 (V6C62_01455) - 314721..314873 (+) 153 WP_002436229.1 hypothetical protein -
  V6C62_RS01455 (V6C62_01460) braR 314904..315569 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  V6C62_RS01460 (V6C62_01465) braS 315575..316471 (+) 897 WP_037550651.1 sensor histidine kinase Regulator
  V6C62_RS01465 (V6C62_01470) - 316581..317330 (+) 750 WP_030059205.1 ABC transporter ATP-binding protein -
  V6C62_RS01470 (V6C62_01475) - 317356..319347 (+) 1992 WP_227489907.1 ABC transporter permease -
  V6C62_RS01475 (V6C62_01480) - 319573..320445 (+) 873 WP_037550647.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25518.37 Da        Isoelectric Point: 4.3102

>NTDB_id=938191 V6C62_RS01455 WP_002436233.1 314904..315569(+) (braR) [Staphylococcus capitis subsp. urealyticus strain Sc1365666]
MKILIVEDDLVIAESLANELSKWNYEVNVVENFDQIMEDFRETEPQLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSVSNDELDVKGCKLILDEAKLVKDDDAVQLSLTELQILK
MLFQNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=938191 V6C62_RS01455 WP_002436233.1 314904..315569(+) (braR) [Staphylococcus capitis subsp. urealyticus strain Sc1365666]
ATGAAGATTCTCATAGTCGAAGATGATTTAGTTATTGCTGAGAGCTTGGCTAATGAACTTTCAAAATGGAATTATGAAGT
GAATGTTGTTGAAAACTTTGATCAAATTATGGAAGATTTTCGTGAAACAGAACCACAACTAGTATTGTTAGATATCAATT
TACCTACACTCAATGGATTTCATTGGTGCCAAGAAATGCGCAAAGAATCTAATGTTCCTATCATGTTTATTAGTTCAAGA
ACCGATAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGACTTTATTGAGAAACCGTTCAATTTATCGCTAAC
AGTAGCGAAGATACAAGCGTTACTTCGCCGTACATACGATTTATCCGTATCAAATGATGAATTAGATGTGAAAGGTTGCA
AGTTGATTCTTGATGAGGCGAAACTCGTAAAGGATGATGACGCTGTTCAATTGTCATTAACAGAACTTCAAATTTTGAAA
ATGTTATTCCAAAATGAAGGAAAATACGTGAGTCGTACAGCATTAATTGAAAAGTGTTGGGAATCTGAAAACTTTATTGA
TGACAATACCTTAGCAGTTAATATGACTAGATTACGCAAGAAGTTATTATCTATAGGCGTTGATGATTTTATTGAAACTA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0S4M7T5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

83.258

100

0.833