Detailed information NTG0938183

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACET1L_RS21620
• Genome accession: NZ_CP169023
• Coordinates: 4226117..4227142 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain UTME-6
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4221117..4232142

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACET1L_RS21610 (ACET1L_21610)	rpmE	4223348..4223560 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACET1L_RS21615 (ACET1L_21615)	priA	4223763..4225961 (+)	2199	WP_001341957.1	primosomal protein N'	Machinery gene
ACET1L_RS21620 (ACET1L_21620)	cytR	4226117..4227142 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACET1L_RS21625 (ACET1L_21625)	ftsN	4227234..4228193 (+)	960	WP_000068830.1	cell division protein FtsN	-
ACET1L_RS21630 (ACET1L_21630)	hslV	4228286..4228816 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACET1L_RS21635 (ACET1L_21635)	hslU	4228826..4230157 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACET1L_RS21640 (ACET1L_21640)	menA	4230224..4231150 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACET1L_RS21645 (ACET1L_21645)	rraA	4231243..4231728 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACET1L_RS21650 (ACET1L_21650)	zapB	4231813..4232058 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=938183 ACET1L_RS21620 WP_000644904.1 4226117..4227142(+) (cytR) [Escherichia coli strain UTME-6]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=938183 ACET1L_RS21620 WP_000644904.1 4226117..4227142(+) (cytR) [Escherichia coli strain UTME-6]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628