Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   V6C67_RS01275 Genome accession   NZ_CP145238
Coordinates   259869..260765 (+) Length   298 a.a.
NCBI ID   WP_002436260.1    Uniprot ID   -
Organism   Staphylococcus capitis subsp. urealyticus strain Sc1365674     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 254869..265765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6C67_RS01250 (V6C67_01250) - 255178..255279 (+) 102 WP_016898541.1 SE2200 family small protein -
  V6C67_RS01255 (V6C67_01255) - 255465..257006 (+) 1542 WP_002436181.1 NAD(P)H-binding protein -
  V6C67_RS01260 (V6C67_01260) - 257204..258688 (-) 1485 WP_002436173.1 alkaline phosphatase -
  V6C67_RS01265 (V6C67_01265) - 259015..259167 (+) 153 WP_002436229.1 hypothetical protein -
  V6C67_RS01270 (V6C67_01270) braR 259198..259863 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  V6C67_RS01275 (V6C67_01275) braS 259869..260765 (+) 897 WP_002436260.1 sensor histidine kinase Regulator
  V6C67_RS01280 (V6C67_01280) - 260875..261624 (+) 750 WP_002436183.1 ABC transporter ATP-binding protein -
  V6C67_RS01285 (V6C67_01285) - 261626..263641 (+) 2016 WP_064210758.1 FtsX-like permease family protein -
  V6C67_RS01290 (V6C67_01290) - 263867..264739 (+) 873 WP_002436204.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34548.84 Da        Isoelectric Point: 5.4242

>NTDB_id=938061 V6C67_RS01275 WP_002436260.1 259869..260765(+) (braS) [Staphylococcus capitis subsp. urealyticus strain Sc1365674]
MLLSFIKSIRNEITIIFCIFLLFALIFYLFSLPFSAFGLALGIVLLIIFIHWWVKYLGFKRNEDLKEKVDNLENELTEVK
NRQVEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVQIDNYTSLALSYLKLLNEESDMTISSVTVNEL
IRPLIMKYRIQFIEQHTKIQYEKCEATVLTDAQWASIMIEQILNNALKYARGKDIWIEFDSAKQTLIIKDNGVGISKADI
PKIFDKGYSGYNGRLNEESSGIGLFIVKHISNHLNHEVDVDSGLGEGTTFKIHFPNED

Nucleotide


Download         Length: 897 bp        

>NTDB_id=938061 V6C67_RS01275 WP_002436260.1 259869..260765(+) (braS) [Staphylococcus capitis subsp. urealyticus strain Sc1365674]
ATGTTGCTATCTTTTATAAAATCGATTCGAAATGAGATTACAATTATATTTTGTATATTTTTATTATTTGCATTAATATT
TTACTTATTTTCATTACCATTTAGTGCCTTCGGTCTTGCGTTAGGAATCGTATTACTCATCATTTTTATTCATTGGTGGG
TAAAGTACCTTGGATTTAAGAGAAATGAGGATCTTAAAGAGAAGGTAGATAATTTGGAAAATGAATTAACTGAAGTAAAA
AATCGCCAAGTAGAATATCGTAATGATGTGGAAAGTTACTTTTTAACATGGGTACACCAAATTAAGACACCTATCACAGC
GTCACAACTATTACTCGAACGTAATGAAGAAAATGTTGTCAATCGCGTAAGACAAGAAATTGTTCAAATTGATAACTATA
CAAGCTTAGCATTGAGTTATTTAAAATTACTCAACGAAGAATCTGATATGACAATTTCATCAGTGACAGTGAATGAATTA
ATACGTCCGCTAATCATGAAATATCGAATTCAGTTTATCGAACAACATACTAAAATTCAGTATGAAAAGTGTGAAGCAAC
TGTTTTAACGGATGCACAATGGGCGTCTATTATGATAGAACAAATTTTAAATAATGCTTTGAAGTACGCGCGTGGAAAAG
ACATTTGGATTGAATTTGATTCTGCTAAACAAACATTAATCATTAAAGACAATGGTGTAGGTATTAGTAAAGCAGATATT
CCTAAAATATTTGATAAAGGCTATTCTGGTTACAACGGCAGACTTAATGAAGAATCAAGCGGCATAGGATTGTTCATTGT
TAAGCATATTTCTAATCATTTGAATCATGAGGTCGATGTAGATTCAGGACTTGGTGAAGGTACGACATTTAAAATACATT
TTCCCAACGAAGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

64.068

98.993

0.634