Detailed information NTG0937900

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: V6C75_RS06375
• Genome accession: NZ_CP145221
• Coordinates: 1318352..1319326 (+)
• Length: 324 a.a.
• NCBI ID: WP_047796322.1
• Uniprot ID: -
• Organism: Staphylococcus capitis subsp. urealyticus strain Sc1365706
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1313352..1324326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6C75_RS06340	rpmG	1313863..1314012 (+)	150	WP_002433802.1	50S ribosomal protein L33	-
V6C75_RS06345	-	1314163..1314714 (+)	552	WP_029625710.1	5-formyltetrahydrofolate cyclo-ligase	-
V6C75_RS06350	-	1314715..1316178 (+)	1464	WP_047796324.1	rhomboid family intramembrane serine protease	-
V6C75_RS06355	-	1316159..1316362 (+)	204	WP_002433937.1	YqgQ family protein	-
V6C75_RS06360	-	1316359..1317345 (+)	987	WP_002433633.1	ROK family glucokinase	-
V6C75_RS06365	-	1317345..1317671 (+)	327	WP_002433945.1	MTH1187 family thiamine-binding protein	-
V6C75_RS06370	-	1317671..1318294 (+)	624	WP_047796323.1	MBL fold metallo-hydrolase	-
V6C75_RS06375	comGA	1318352..1319326 (+)	975	WP_047796322.1	competence type IV pilus ATPase ComGA	Machinery gene
V6C75_RS06380	comGB	1319298..1320365 (+)	1068	WP_047796321.1	competence type IV pilus assembly protein ComGB	-
V6C75_RS06385	comGC	1320384..1320695 (+)	312	WP_029625707.1	competence type IV pilus major pilin ComGC	Machinery gene
V6C75_RS06390	comGD	1320673..1321122 (+)	450	WP_162488576.1	competence type IV pilus minor pilin ComGD	-
V6C75_RS06395	-	1321109..1321408 (+)	300	WP_002433765.1	hypothetical protein	-
V6C75_RS06400	comGF	1321326..1321817 (+)	492	WP_037560565.1	competence type IV pilus minor pilin ComGF	-
V6C75_RS06405	-	1321987..1322496 (+)	510	WP_029625706.1	shikimate kinase	-
V6C75_RS06410	gcvT	1322705..1323796 (+)	1092	WP_047796320.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37052.85 Da
• Isoelectric Point: 7.6989

>NTDB_id=937900 V6C75_RS06375 WP_047796322.1 1318352..1319326(+) (comGA) [Staphylococcus capitis subsp. urealyticus strain Sc1365706]
MKMLFQEIVNYAIKHAASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKF
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLCSGPTGSGKSTLMYQMVMHAHQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT

Nucleotide

• Length: 975 bp

>NTDB_id=937900 V6C75_RS06375 WP_047796322.1 1318352..1319326(+) (comGA) [Staphylococcus capitis subsp. urealyticus strain Sc1365706]
ATGAAAATGTTATTCCAAGAGATAGTTAATTATGCTATAAAGCACGCTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTTGCCCAAAGCGGAAGATATACTTATAAATTT
CAAAATATGTATTACTTAAGAATCTCTACGCTACCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
GTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCCATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAGGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTAACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTATCTAAGGAAGGGGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.588	99.691	0.704
comGA	Staphylococcus aureus N315	70.588	99.691	0.704