Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   V6C75_RS01215 Genome accession   NZ_CP145221
Coordinates   287223..287888 (+) Length   221 a.a.
NCBI ID   WP_367081114.1    Uniprot ID   -
Organism   Staphylococcus capitis subsp. urealyticus strain Sc1365706     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 282223..292888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6C75_RS01190 - 282308..282934 (-) 627 WP_002436199.1 FMN-dependent NADH-azoreductase -
  V6C75_RS01195 - 283206..283307 (+) 102 WP_016898541.1 SE2200 family small protein -
  V6C75_RS01200 - 283490..285031 (+) 1542 WP_367081112.1 NAD(P)H-binding protein -
  V6C75_RS01205 - 285229..286713 (-) 1485 WP_002436173.1 alkaline phosphatase -
  V6C75_RS01210 - 287040..287192 (+) 153 WP_002436229.1 hypothetical protein -
  V6C75_RS01215 braR 287223..287888 (+) 666 WP_367081114.1 response regulator transcription factor Regulator
  V6C75_RS01220 braS 287894..288790 (+) 897 WP_058121551.1 sensor histidine kinase Regulator
  V6C75_RS01225 - 288900..289649 (+) 750 WP_058121550.1 ABC transporter ATP-binding protein -
  V6C75_RS01230 - 289651..291666 (+) 2016 WP_103156981.1 ABC transporter permease -
  V6C75_RS01235 - 291892..292764 (+) 873 WP_103156982.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25545.39 Da        Isoelectric Point: 4.3102

>NTDB_id=937883 V6C75_RS01215 WP_367081114.1 287223..287888(+) (braR) [Staphylococcus capitis subsp. urealyticus strain Sc1365706]
MKILIVEDDLVIAENLANELSKWNYEVNVVENFDQIMEDFRETEPQLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSVSNDELDVKGCKLILDEAKLVKDDDAVQLSLTELQILK
MLFQNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=937883 V6C75_RS01215 WP_367081114.1 287223..287888(+) (braR) [Staphylococcus capitis subsp. urealyticus strain Sc1365706]
ATGAAGATTCTCATAGTCGAAGATGATTTAGTTATTGCTGAGAACTTGGCTAATGAACTTTCAAAATGGAATTATGAAGT
GAATGTTGTTGAAAACTTTGATCAAATTATGGAAGATTTTCGTGAAACAGAACCACAACTAGTATTATTAGATATCAATT
TACCTACACTCAATGGATTTCATTGGTGCCAAGAAATGCGCAAAGAATCTAATGTTCCTATCATGTTTATTAGTTCAAGA
ACCGATAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGACTTTATTGAGAAACCGTTCAATTTATCGCTAAC
AGTAGCGAAGATACAAGCGTTACTTCGCCGTACATACGATTTATCCGTATCAAATGATGAATTAGATGTGAAAGGTTGCA
AGTTGATTCTCGATGAGGCGAAACTCGTAAAGGATGATGACGCTGTTCAATTGTCATTAACAGAACTTCAAATTTTGAAA
ATGTTATTCCAAAATGAAGGAAAATACGTGAGTCGTACAGCATTAATTGAAAAGTGTTGGGAATCTGAAAACTTTATCGA
TGACAATACCTTAGCAGTTAATATGACTAGATTACGCAAGAAGTTATTATCTATAGGCGTTGATGATTTTATTGAAACTA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

82.805

100

0.828