Detailed information NTG0937873

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACET1Q_RS27030
• Genome accession: NZ_CP169003
• Coordinates: 5306325..5307350 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain UTAK-23
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5301325..5312350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACET1Q_RS27020 (ACET1Q_27085)	rpmE	5303556..5303768 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACET1Q_RS27025 (ACET1Q_27090)	priA	5303971..5306169 (+)	2199	WP_001341957.1	primosomal protein N'	Machinery gene
ACET1Q_RS27030 (ACET1Q_27095)	cytR	5306325..5307350 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACET1Q_RS27035 (ACET1Q_27100)	ftsN	5307442..5308401 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACET1Q_RS27040 (ACET1Q_27105)	hslV	5308494..5309024 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACET1Q_RS27045 (ACET1Q_27110)	hslU	5309034..5310365 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACET1Q_RS27050 (ACET1Q_27115)	menA	5310432..5311358 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACET1Q_RS27055 (ACET1Q_27120)	rraA	5311451..5311936 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACET1Q_RS27060 (ACET1Q_27125)	zapB	5312021..5312266 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=937873 ACET1Q_RS27030 WP_000644904.1 5306325..5307350(+) (cytR) [Escherichia coli strain UTAK-23]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=937873 ACET1Q_RS27030 WP_000644904.1 5306325..5307350(+) (cytR) [Escherichia coli strain UTAK-23]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628