Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   V6C56_RS01160 Genome accession   NZ_CP145208
Coordinates   275472..276368 (+) Length   298 a.a.
NCBI ID   WP_037550651.1    Uniprot ID   -
Organism   Staphylococcus capitis subsp. urealyticus strain Sc1516939     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 270472..281368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6C56_RS01135 (V6C56_01140) - 270787..270888 (+) 102 WP_016898541.1 SE2200 family small protein -
  V6C56_RS01140 (V6C56_01145) - 271072..272613 (+) 1542 WP_023351027.1 NAD(P)H-binding protein -
  V6C56_RS01145 (V6C56_01150) - 272807..274291 (-) 1485 WP_030059210.1 alkaline phosphatase -
  V6C56_RS01150 (V6C56_01155) - 274618..274770 (+) 153 WP_002436229.1 hypothetical protein -
  V6C56_RS01155 (V6C56_01160) braR 274801..275466 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  V6C56_RS01160 (V6C56_01165) braS 275472..276368 (+) 897 WP_037550651.1 sensor histidine kinase Regulator
  V6C56_RS01165 (V6C56_01170) - 276478..277227 (+) 750 WP_030059205.1 ABC transporter ATP-binding protein -
  V6C56_RS01170 (V6C56_01175) - 277427..279244 (+) 1818 WP_248289739.1 ABC transporter permease -
  V6C56_RS01175 (V6C56_01180) - 279470..280342 (+) 873 WP_037550647.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34509.81 Da        Isoelectric Point: 5.6334

>NTDB_id=937747 V6C56_RS01160 WP_037550651.1 275472..276368(+) (braS) [Staphylococcus capitis subsp. urealyticus strain Sc1516939]
MLLSFIKSIRNEITIIFCIFLLFALIFYLFSLPFSAFGLALGIVLLIIVIHWWVKYLGFKRNEDLKEKVDNLENELTEVK
NRQVEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVQIDNYTSLALSYLKLLNEESDMTISSVTVNEL
IRPLIMKYRIQFIEQHTKIHYEKCEATVLTDAQWASIMIEQILNNALKYARGKDIWIEFDSAKQTLIIKDNGVGISKADI
PKIFDKGYSGYNGRLNEESSGIGLFIVKHISNHLNHEVDVDSGLGEGTTFKIHFPNED

Nucleotide


Download         Length: 897 bp        

>NTDB_id=937747 V6C56_RS01160 WP_037550651.1 275472..276368(+) (braS) [Staphylococcus capitis subsp. urealyticus strain Sc1516939]
ATGTTACTATCTTTTATAAAATCGATTCGAAATGAGATTACAATTATATTTTGTATATTTTTATTATTTGCATTAATATT
TTACTTATTTTCATTACCATTTAGTGCCTTCGGTCTTGCGTTAGGAATCGTATTACTCATCATTGTTATTCATTGGTGGG
TAAAGTACCTTGGATTTAAGAGAAATGAGGATCTTAAAGAGAAGGTAGATAATTTGGAAAATGAATTAACTGAAGTAAAA
AATCGCCAAGTAGAATATCGTAATGATGTGGAAAGTTACTTTTTAACATGGGTACACCAAATTAAGACACCTATCACAGC
GTCACAACTATTACTCGAACGTAATGAAGAAAATGTTGTCAATCGCGTAAGACAAGAAATTGTTCAAATTGATAACTATA
CAAGCTTAGCATTGAGTTATTTAAAATTACTCAACGAAGAATCTGATATGACAATTTCATCAGTGACAGTGAATGAACTA
ATACGTCCGTTAATCATGAAATATCGAATTCAATTTATCGAACAACATACTAAAATACACTATGAAAAGTGTGAAGCAAC
TGTTTTAACGGATGCACAATGGGCGTCTATTATGATAGAACAAATTTTAAATAATGCTTTGAAGTACGCGCGTGGAAAAG
ACATTTGGATTGAATTTGATTCTGCTAAACAAACATTAATCATTAAAGACAATGGTGTAGGTATTAGTAAAGCAGATATT
CCTAAAATATTTGATAAAGGCTATTCTGGTTACAACGGCAGACTTAATGAAGAATCAAGCGGCATAGGATTGTTCATTGT
TAAGCATATTTCTAATCATTTGAATCATGAGGTCGATGTAGATTCAGGACTTGGTGAAGGTACGACATTTAAAATACATT
TTCCCAACGAAGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

64.407

98.993

0.638