Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   V6C54_RS01245 Genome accession   NZ_CP145201
Coordinates   295417..296313 (+) Length   298 a.a.
NCBI ID   WP_047796787.1    Uniprot ID   -
Organism   Staphylococcus capitis subsp. urealyticus strain Sc1516943     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 290417..301313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6C54_RS01220 (V6C54_01235) - 290732..290833 (+) 102 WP_016898541.1 SE2200 family small protein -
  V6C54_RS01225 (V6C54_01240) - 291017..292558 (+) 1542 WP_047796790.1 NAD(P)H-binding protein -
  V6C54_RS01230 (V6C54_01245) - 292752..294236 (-) 1485 WP_047796789.1 alkaline phosphatase -
  V6C54_RS01235 (V6C54_01250) - 294563..294715 (+) 153 WP_192940984.1 hypothetical protein -
  V6C54_RS01240 (V6C54_01255) braR 294746..295411 (+) 666 WP_047796788.1 response regulator transcription factor Regulator
  V6C54_RS01245 (V6C54_01260) braS 295417..296313 (+) 897 WP_047796787.1 sensor histidine kinase Regulator
  V6C54_RS01250 (V6C54_01265) - 296423..297172 (+) 750 WP_047796786.1 ABC transporter ATP-binding protein -
  V6C54_RS01255 (V6C54_01270) - 297366..299189 (+) 1824 WP_233420416.1 FtsX-like permease family protein -
  V6C54_RS01260 (V6C54_01275) - 299417..300289 (+) 873 WP_047796784.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34614.94 Da        Isoelectric Point: 5.4142

>NTDB_id=937677 V6C54_RS01245 WP_047796787.1 295417..296313(+) (braS) [Staphylococcus capitis subsp. urealyticus strain Sc1516943]
MLLSFIKSIRNEITIIFCIFLLFALIFYLFSLPFSAFGLALGIVLLIIFIHWWVKYLGFKRNEDLKEKIDDLENELTEVK
NRQVEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVQIDNYTSLALSYLKLLNEESDMTISSVTVNEL
IRPLIMKYRIQFIEQHTKIHYEKCEATVLTDAQWASIMIEQILNNALKYARGKDIWIEFDSAKQTLIIKDNGVGISKADI
PKIFDKGYSGYNGRLNEESSGIGLFIVKHISNHLNHVVDVDSELGEGTTFKIHFPNED

Nucleotide


Download         Length: 897 bp        

>NTDB_id=937677 V6C54_RS01245 WP_047796787.1 295417..296313(+) (braS) [Staphylococcus capitis subsp. urealyticus strain Sc1516943]
ATGTTACTATCTTTTATAAAATCGATTCGAAATGAGATTACAATTATATTTTGTATATTTTTATTATTTGCATTAATATT
TTACTTATTTTCATTACCATTTAGTGCCTTCGGGCTTGCGTTAGGAATCGTATTACTCATCATTTTTATTCATTGGTGGG
TCAAGTACCTTGGATTTAAGAGAAATGAGGATCTTAAAGAGAAGATAGATGATTTGGAAAATGAATTAACTGAAGTAAAA
AATCGCCAAGTAGAATATCGTAATGATGTTGAAAGTTACTTTTTAACATGGGTACACCAAATTAAGACACCTATCACAGC
GTCACAACTATTACTCGAACGTAATGAAGAAAATGTTGTCAATCGCGTAAGACAAGAAATTGTTCAAATTGATAACTATA
CAAGCTTAGCATTGAGTTATTTAAAATTACTCAACGAAGAATCTGATATGACAATTTCATCAGTGACAGTGAATGAATTA
ATACGTCCGTTAATCATGAAATATCGAATTCAATTTATCGAACAACATACTAAAATACACTATGAAAAGTGTGAAGCAAC
TGTTTTAACGGATGCACAATGGGCGTCTATTATGATAGAACAAATTTTAAATAATGCTTTGAAGTACGCGCGTGGAAAAG
ACATTTGGATTGAATTTGATTCTGCTAAACAAACATTAATCATTAAAGACAATGGTGTAGGTATTAGTAAAGCAGATATT
CCTAAAATATTTGATAAAGGCTATTCTGGTTACAACGGCAGACTTAATGAAGAATCAAGCGGCATAGGATTGTTCATTGT
TAAGCATATTTCTAATCATTTGAATCATGTAGTCGATGTGGATTCAGAACTTGGTGAAGGTACTACATTTAAAATACATT
TTCCCAATGAAGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

64.407

98.993

0.638