Detailed information NTG0937552

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACET1C_RS25750
• Genome accession: NZ_CP168987
• Coordinates: 5122806..5123831 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain UTAK-10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5117806..5128831

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACET1C_RS25740 (ACET1C_25740)	rpmE	5120037..5120249 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACET1C_RS25745 (ACET1C_25745)	priA	5120452..5122650 (+)	2199	WP_032316240.1	primosomal protein N'	Machinery gene
ACET1C_RS25750 (ACET1C_25750)	cytR	5122806..5123831 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACET1C_RS25755 (ACET1C_25755)	ftsN	5123923..5124882 (+)	960	WP_000068833.1	cell division protein FtsN	-
ACET1C_RS25760 (ACET1C_25760)	hslV	5124975..5125505 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACET1C_RS25765 (ACET1C_25765)	hslU	5125515..5126847 (+)	1333	Protein_5043	HslU--HslV peptidase ATPase subunit	-
ACET1C_RS25770 (ACET1C_25770)	menA	5126914..5127840 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACET1C_RS25775 (ACET1C_25775)	rraA	5127933..5128418 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACET1C_RS25780 (ACET1C_25780)	zapB	5128503..5128748 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=937552 ACET1C_RS25750 WP_000644904.1 5122806..5123831(+) (cytR) [Escherichia coli strain UTAK-10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=937552 ACET1C_RS25750 WP_000644904.1 5122806..5123831(+) (cytR) [Escherichia coli strain UTAK-10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628