Detailed information NTG0937472

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACET1N_RS25880
• Genome accession: NZ_CP168984
• Coordinates: 5107989..5109014 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain UTME-3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5102989..5114014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACET1N_RS25860 (ACET1N_25860)	metJ	5104174..5104491 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACET1N_RS25865 (ACET1N_25865)	yiiX	5104551..5105159 (+)	609	WP_000702305.1	YiiX family permuted papain-like enzyme	-
ACET1N_RS25870 (ACET1N_25870)	rpmE	5105220..5105432 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACET1N_RS25875 (ACET1N_25875)	priA	5105635..5107833 (+)	2199	WP_373964569.1	primosomal protein N'	Machinery gene
ACET1N_RS25880 (ACET1N_25880)	cytR	5107989..5109014 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACET1N_RS25885 (ACET1N_25885)	ftsN	5109106..5110065 (+)	960	WP_071830180.1	cell division protein FtsN	-
ACET1N_RS25890 (ACET1N_25890)	hslV	5110158..5110688 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACET1N_RS25895 (ACET1N_25895)	hslU	5110698..5112029 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACET1N_RS25900 (ACET1N_25900)	menA	5112096..5113022 (+)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACET1N_RS25905 (ACET1N_25905)	rraA	5113115..5113600 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=937472 ACET1N_RS25880 WP_000644904.1 5107989..5109014(+) (cytR) [Escherichia coli strain UTME-3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=937472 ACET1N_RS25880 WP_000644904.1 5107989..5109014(+) (cytR) [Escherichia coli strain UTME-3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCTCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGCCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628