Detailed information NTG0937451

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: V5F86_RS19020
• Genome accession: NZ_CP145137
• Coordinates: 3757672..3758817 (+)
• Length: 381 a.a.
• NCBI ID: WP_338443406.1
• Uniprot ID: -
• Organism: Bacillus spizizenii strain kcgeb_sc
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3752672..3763817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5F86_RS19000 (V5F86_19005)	-	3752807..3753967 (+)	1161	WP_338444555.1	insulinase family protein	-
V5F86_RS19005 (V5F86_19010)	-	3753972..3755255 (+)	1284	WP_338443403.1	pitrilysin family protein	-
V5F86_RS19010 (V5F86_19015)	-	3755252..3755953 (+)	702	WP_338443404.1	bacteriocin biosynthesis protein AlbG	-
V5F86_RS19015 (V5F86_19020)	-	3756090..3757445 (-)	1356	WP_338443405.1	YncE family protein	-
V5F86_RS19020 (V5F86_19025)	rapF	3757672..3758817 (+)	1146	WP_338443406.1	response regulator aspartate phosphatase RapF	Regulator
V5F86_RS19025 (V5F86_19030)	phrF	3758801..3758920 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
V5F86_RS19030 (V5F86_19035)	-	3759148..3759624 (+)	477	WP_015384936.1	hypothetical protein	-
V5F86_RS19035 (V5F86_19040)	-	3759884..3760570 (+)	687	WP_338443408.1	hypothetical protein	-
V5F86_RS19040 (V5F86_19045)	-	3762046..3762693 (+)	648	WP_129092783.1	ABC transporter ATP-binding protein	-
V5F86_RS19045 (V5F86_19050)	-	3762686..3763249 (+)	564	WP_015483840.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45636.09 Da
• Isoelectric Point: 5.1517

>NTDB_id=937451 V5F86_RS19020 WP_338443406.1 3757672..3758817(+) (rapF) [Bacillus spizizenii strain kcgeb_sc]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYSIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAREYHSKGMAYSQKAGDLIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFALDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVRLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=937451 V5F86_RS19020 WP_338443406.1 3757672..3758817(+) (rapF) [Bacillus spizizenii strain kcgeb_sc]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAGTATTTGCGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGATCAGGATCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCACTAGAGAAAATGCGGATCGAGGAACAGCCGAGA
TTGTCAGATTTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
GGGCATGTATGAGCTAGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTTAAAAAGGCCGAAAGCAAGTTGATATTTG
TTAAGGATCGAATAGAGAAGGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTATAGTATAAGATTGCTTCAGTGTCACTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTACTCTATGGCGGAAG
CTGAGAATCAGCCCCAATTAATGGGAAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCGTAACATATTTCAAAAGAGCAATTGCTGTTTTTGAAGAATCTAACATTCTTCCTTCCCTGCCCCAAGCTTATTTTTT
AATTACACAAATTCATTATAAATTAGGAAAAATGGATAAAGCCCGTGAATATCATAGTAAGGGAATGGCTTATTCTCAAA
AGGCCGGAGATTTAATATATTTATCGGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTCTGAAGGTGGAACAAGTGAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	96.85	100	0.969
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572