Detailed information NTG0937447

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V5F86_RS17950
• Genome accession: NZ_CP145137
• Coordinates: 3532562..3533719 (-)
• Length: 385 a.a.
• NCBI ID: WP_338443307.1
• Uniprot ID: -
• Organism: Bacillus spizizenii strain kcgeb_sc
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3527562..3538719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5F86_RS17920 (V5F86_17925)	-	3527815..3528234 (-)	420	WP_338443305.1	TIGR03826 family flagellar region protein	-
V5F86_RS17925 (V5F86_17930)	comFC	3528307..3529029 (-)	723	WP_338443306.1	ComF family protein	Machinery gene
V5F86_RS17930 (V5F86_17935)	-	3528993..3529289 (-)	297	WP_014115352.1	competence protein ComFB	-
V5F86_RS17935 (V5F86_17940)	comFA	3529358..3530740 (-)	1383	WP_338444548.1	ATP-dependent helicase ComFA	Machinery gene
V5F86_RS17940 (V5F86_17945)	-	3530847..3531692 (-)	846	WP_014115354.1	DegV family protein	-
V5F86_RS17945 (V5F86_17950)	degU	3531790..3532479 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
V5F86_RS17950 (V5F86_17955)	degS	3532562..3533719 (-)	1158	WP_338443307.1	two-component sensor histidine kinase DegS	Regulator
V5F86_RS17955 (V5F86_17960)	-	3533935..3534588 (+)	654	WP_061186930.1	YigZ family protein	-
V5F86_RS17960 (V5F86_17965)	-	3534588..3535712 (+)	1125	WP_338443308.1	LCP family protein	-
V5F86_RS17965 (V5F86_17970)	-	3535795..3536871 (-)	1077	WP_061186932.1	MraY family glycosyltransferase	-
V5F86_RS17970 (V5F86_17975)	-	3537016..3538209 (-)	1194	WP_338444549.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 45005.82 Da
• Isoelectric Point: 6.2957

>NTDB_id=937447 V5F86_RS17950 WP_338443307.1 3532562..3533719(-) (degS) [Bacillus spizizenii strain kcgeb_sc]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQMRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=937447 V5F86_RS17950 WP_338443307.1 3532562..3533719(-) (degS) [Bacillus spizizenii strain kcgeb_sc]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAGCTGAAACAAATTAAACAGCAGG
TGTATGAAGTTATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGGTTCAGTGAAGAAGAAATCCGCAATGCTTACGAAAAAGCCCATAAACTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAAATGCGGGAACGCCGGGATGATTTAGAGCGAAGATTGTTAGGCCTTCAGGAAATCATTGAGC
GGTCTGAATCATTAGTAAGCCAAATAACAGTTGTGCTTAACTACTTGAATCAGGATTTGCGCGAGGTCGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCACAGGAAGAAGAGCGAAAAAGAGTCTCCAGAGA
AATTCATGACGGACCTGCTCAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GTACTGAGGACGGATTCCAAGAAATTAAAAATCTCCGTCAAAATGTGCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGTGAAACAGAGGATCAGCGGCTTGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAAATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGAAAAGGGTTCGACTTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATCTATTGGAAGGAACCATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.481	100	0.995