Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | CJ189_RS00360 | Genome accession | NZ_CP145131 |
| Coordinates | 79745..81133 (+) | Length | 462 a.a. |
| NCBI ID | WP_064292691.1 | Uniprot ID | A0A178HH97 |
| Organism | Aerococcus loyolae strain UMB0088 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 74745..86133
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJ189_RS00345 (CJ189_0000345) | - | 75720..78644 (+) | 2925 | WP_070598021.1 | insulinase family protein | - |
| CJ189_RS00350 (CJ189_0000350) | - | 78863..79048 (-) | 186 | WP_064292690.1 | hypothetical protein | - |
| CJ189_RS00355 (CJ189_0000355) | - | 79216..79725 (+) | 510 | WP_064292706.1 | dUTP diphosphatase | - |
| CJ189_RS00360 (CJ189_0000360) | radA | 79745..81133 (+) | 1389 | WP_064292691.1 | DNA repair protein RadA | Machinery gene |
| CJ189_RS00365 (CJ189_0000365) | - | 81220..82392 (+) | 1173 | WP_064292692.1 | PIN/TRAM domain-containing protein | - |
| CJ189_RS00370 (CJ189_0000370) | - | 82500..83315 (-) | 816 | WP_064292693.1 | Cof-type HAD-IIB family hydrolase | - |
| CJ189_RS00375 (CJ189_0000375) | - | 83482..84183 (+) | 702 | WP_064292694.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 462 a.a. Molecular weight: 50447.68 Da Isoelectric Point: 6.4078
>NTDB_id=937295 CJ189_RS00360 WP_064292691.1 79745..81133(+) (radA) [Aerococcus loyolae strain UMB0088]
MAKKKRKTVYTCQACGYESPQWYGKCPQCGAWNTLEEEVIAGKPIRQAGTEVNQKKAKPERLKEVSQAEEKRVKTGLGEF
NRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVAKQLSDNGSRVLYVSGEESLHQIKMRADRLGYQDADFFVYAETDLLAIE
AAISDTQADFVVIDSIQTMVHPNNESLAGSVSQVREATGELMHIAKSSGIAIFVVGHVTKEGNIAGPRILEHMVDTVLYL
EGEKHNTFRILRAVKNRFGSTNEIGVFDMKSQGLEEVTNPSQLFLEERLMGANGSAVVASMEGTRPILTEIQALLSATAF
GNARRTASGLDYSRVTLIMAVLEKRAHLMLQNQDAYLKSTGGVKLDEPAIDLAIAVAVASSYWEKETQASDCFVGEIGLT
GEIRRISRINERIQEAEKLGFKRIFIPYGNLQGLATDSQDIEIIGAKTLTQVLKEVFLPQGR
MAKKKRKTVYTCQACGYESPQWYGKCPQCGAWNTLEEEVIAGKPIRQAGTEVNQKKAKPERLKEVSQAEEKRVKTGLGEF
NRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVAKQLSDNGSRVLYVSGEESLHQIKMRADRLGYQDADFFVYAETDLLAIE
AAISDTQADFVVIDSIQTMVHPNNESLAGSVSQVREATGELMHIAKSSGIAIFVVGHVTKEGNIAGPRILEHMVDTVLYL
EGEKHNTFRILRAVKNRFGSTNEIGVFDMKSQGLEEVTNPSQLFLEERLMGANGSAVVASMEGTRPILTEIQALLSATAF
GNARRTASGLDYSRVTLIMAVLEKRAHLMLQNQDAYLKSTGGVKLDEPAIDLAIAVAVASSYWEKETQASDCFVGEIGLT
GEIRRISRINERIQEAEKLGFKRIFIPYGNLQGLATDSQDIEIIGAKTLTQVLKEVFLPQGR
Nucleotide
Download Length: 1389 bp
>NTDB_id=937295 CJ189_RS00360 WP_064292691.1 79745..81133(+) (radA) [Aerococcus loyolae strain UMB0088]
ATGGCTAAAAAGAAGCGAAAAACTGTCTACACTTGCCAGGCTTGTGGCTATGAATCACCTCAGTGGTATGGGAAATGTCC
CCAATGCGGAGCTTGGAATACTCTGGAAGAGGAAGTGATTGCGGGGAAGCCCATCCGCCAAGCTGGGACAGAGGTCAATC
AGAAAAAAGCCAAGCCTGAACGCCTCAAGGAAGTCAGCCAGGCGGAAGAAAAACGGGTAAAGACTGGCTTAGGCGAGTTC
AACCGGGTCCTCGGTGGCGGGGTAGTCCCTGGGTCTTTGGTCCTGATTGGTGGGGATCCCGGCATTGGGAAGTCAACCCT
GCTCCTCCAGGTGGCCAAGCAATTAAGTGATAATGGTAGCCGGGTCCTCTATGTTTCCGGTGAAGAAAGTCTACATCAAA
TCAAGATGCGGGCTGACCGTCTAGGCTACCAGGATGCGGACTTTTTTGTTTATGCGGAAACCGACCTCTTGGCCATTGAA
GCGGCGATTTCTGATACCCAGGCGGATTTTGTGGTGATTGATTCCATTCAAACCATGGTCCATCCCAATAATGAATCCTT
AGCCGGTAGTGTCAGTCAGGTCAGAGAAGCGACCGGGGAACTCATGCATATCGCCAAAAGCTCTGGAATCGCCATCTTTG
TGGTCGGCCATGTGACCAAGGAAGGTAATATTGCCGGACCGCGGATTCTCGAACACATGGTGGACACAGTCTTGTACTTG
GAAGGGGAGAAGCATAACACCTTCCGAATCCTAAGAGCGGTCAAAAACCGTTTTGGGTCGACCAATGAAATCGGAGTTTT
TGACATGAAAAGTCAGGGCCTGGAAGAGGTCACCAACCCTAGCCAGCTCTTTTTAGAAGAACGGCTCATGGGAGCCAATG
GGTCGGCAGTGGTTGCTTCCATGGAAGGAACGCGTCCGATTCTAACCGAAATCCAAGCCCTCTTGTCGGCTACAGCCTTT
GGGAATGCCCGCCGTACCGCCAGTGGTTTGGACTATTCCCGGGTGACCCTCATTATGGCGGTTTTAGAGAAGCGGGCCCA
TCTCATGCTGCAGAACCAAGATGCCTACCTTAAGTCAACTGGTGGGGTCAAACTCGATGAACCGGCCATTGACCTAGCTA
TTGCTGTAGCTGTGGCTTCCAGTTACTGGGAGAAGGAAACCCAGGCCAGCGATTGCTTTGTGGGTGAGATTGGCCTGACC
GGTGAAATTCGTCGGATTTCCCGGATTAATGAACGGATCCAAGAAGCGGAAAAATTAGGTTTTAAACGGATCTTTATCCC
CTATGGGAACCTGCAAGGCCTGGCGACCGATAGTCAAGACATTGAAATTATTGGTGCCAAGACCCTGACTCAAGTTCTCA
AAGAAGTCTTTCTCCCTCAGGGAAGATAG
ATGGCTAAAAAGAAGCGAAAAACTGTCTACACTTGCCAGGCTTGTGGCTATGAATCACCTCAGTGGTATGGGAAATGTCC
CCAATGCGGAGCTTGGAATACTCTGGAAGAGGAAGTGATTGCGGGGAAGCCCATCCGCCAAGCTGGGACAGAGGTCAATC
AGAAAAAAGCCAAGCCTGAACGCCTCAAGGAAGTCAGCCAGGCGGAAGAAAAACGGGTAAAGACTGGCTTAGGCGAGTTC
AACCGGGTCCTCGGTGGCGGGGTAGTCCCTGGGTCTTTGGTCCTGATTGGTGGGGATCCCGGCATTGGGAAGTCAACCCT
GCTCCTCCAGGTGGCCAAGCAATTAAGTGATAATGGTAGCCGGGTCCTCTATGTTTCCGGTGAAGAAAGTCTACATCAAA
TCAAGATGCGGGCTGACCGTCTAGGCTACCAGGATGCGGACTTTTTTGTTTATGCGGAAACCGACCTCTTGGCCATTGAA
GCGGCGATTTCTGATACCCAGGCGGATTTTGTGGTGATTGATTCCATTCAAACCATGGTCCATCCCAATAATGAATCCTT
AGCCGGTAGTGTCAGTCAGGTCAGAGAAGCGACCGGGGAACTCATGCATATCGCCAAAAGCTCTGGAATCGCCATCTTTG
TGGTCGGCCATGTGACCAAGGAAGGTAATATTGCCGGACCGCGGATTCTCGAACACATGGTGGACACAGTCTTGTACTTG
GAAGGGGAGAAGCATAACACCTTCCGAATCCTAAGAGCGGTCAAAAACCGTTTTGGGTCGACCAATGAAATCGGAGTTTT
TGACATGAAAAGTCAGGGCCTGGAAGAGGTCACCAACCCTAGCCAGCTCTTTTTAGAAGAACGGCTCATGGGAGCCAATG
GGTCGGCAGTGGTTGCTTCCATGGAAGGAACGCGTCCGATTCTAACCGAAATCCAAGCCCTCTTGTCGGCTACAGCCTTT
GGGAATGCCCGCCGTACCGCCAGTGGTTTGGACTATTCCCGGGTGACCCTCATTATGGCGGTTTTAGAGAAGCGGGCCCA
TCTCATGCTGCAGAACCAAGATGCCTACCTTAAGTCAACTGGTGGGGTCAAACTCGATGAACCGGCCATTGACCTAGCTA
TTGCTGTAGCTGTGGCTTCCAGTTACTGGGAGAAGGAAACCCAGGCCAGCGATTGCTTTGTGGGTGAGATTGGCCTGACC
GGTGAAATTCGTCGGATTTCCCGGATTAATGAACGGATCCAAGAAGCGGAAAAATTAGGTTTTAAACGGATCTTTATCCC
CTATGGGAACCTGCAAGGCCTGGCGACCGATAGTCAAGACATTGAAATTATTGGTGCCAAGACCCTGACTCAAGTTCTCA
AAGAAGTCTTTCTCCCTCAGGGAAGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Streptococcus pneumoniae Rx1 |
63.355 |
98.052 |
0.621 |
| radA | Streptococcus pneumoniae D39 |
63.355 |
98.052 |
0.621 |
| radA | Streptococcus pneumoniae R6 |
63.355 |
98.052 |
0.621 |
| radA | Streptococcus pneumoniae TIGR4 |
63.355 |
98.052 |
0.621 |
| radA | Streptococcus mitis SK321 |
63.355 |
98.052 |
0.621 |
| radA | Streptococcus mitis NCTC 12261 |
63.135 |
98.052 |
0.619 |
| radA | Bacillus subtilis subsp. subtilis str. 168 |
62.719 |
98.701 |
0.619 |