Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   V3314_RS01580 Genome accession   NZ_CP145113
Coordinates   351837..352238 (-) Length   133 a.a.
NCBI ID   WP_003257770.1    Uniprot ID   A0AAI8FHY9
Organism   Pseudomonas sp. TE3-3-F2023     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 346837..357238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3314_RS01565 (V3314_01565) - 348807..350831 (-) 2025 WP_235431385.1 methyl-accepting chemotaxis protein -
  V3314_RS01570 (V3314_01570) - 350873..351427 (-) 555 WP_003257767.1 chemotaxis protein CheW -
  V3314_RS01575 (V3314_01575) pilH 351424..351789 (-) 366 WP_025340906.1 twitching motility response regulator PilH -
  V3314_RS01580 (V3314_01580) pilG 351837..352238 (-) 402 WP_003257770.1 response regulator Regulator
  V3314_RS01585 (V3314_01585) gshB 352536..353489 (+) 954 WP_338459852.1 glutathione synthase -
  V3314_RS01590 (V3314_01590) - 353581..354486 (+) 906 WP_046613438.1 energy transducer TonB -
  V3314_RS01595 (V3314_01595) - 354665..355234 (+) 570 WP_015272081.1 YqgE/AlgH family protein -
  V3314_RS01600 (V3314_01600) ruvX 355234..355671 (+) 438 WP_013974530.1 Holliday junction resolvase RuvX -
  V3314_RS01605 (V3314_01605) pyrR 355721..356239 (+) 519 WP_025340908.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14576.82 Da        Isoelectric Point: 6.4772

>NTDB_id=937235 V3314_RS01580 WP_003257770.1 351837..352238(-) (pilG) [Pseudomonas sp. TE3-3-F2023]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAAQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=937235 V3314_RS01580 WP_003257770.1 351837..352238(-) (pilG) [Pseudomonas sp. TE3-3-F2023]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCGCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATCTTCG
TCGATGTGTTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGGTAATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTCATTTTGCTGTCGTCACGTGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCACGTGCCCGGTTTTGCCGCAGCCCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632