Detailed information NTG0937134

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AAH690_RS15185
• Genome accession: NZ_CP168949
• Coordinates: 3105705..3106730 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain IH5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3100705..3111730

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAH690_RS15155 (AAH690_15155)	zapB	3100789..3101034 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AAH690_RS15160 (AAH690_15160)	rraA	3101119..3101604 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AAH690_RS15165 (AAH690_15165)	menA	3101697..3102623 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AAH690_RS15170 (AAH690_15170)	hslU	3102690..3104021 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AAH690_RS15175 (AAH690_15175)	hslV	3104031..3104561 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AAH690_RS15180 (AAH690_15180)	ftsN	3104654..3105613 (-)	960	WP_000068837.1	cell division protein FtsN	-
AAH690_RS15185 (AAH690_15185)	cytR	3105705..3106730 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AAH690_RS15190 (AAH690_15190)	priA	3106886..3109084 (-)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
AAH690_RS15195 (AAH690_15195)	rpmE	3109287..3109499 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AAH690_RS15200 (AAH690_15200)	-	3109659..3109754 (+)	96	Protein_2998	hypothetical protein	-
AAH690_RS15205 (AAH690_15205)	-	3109829..3110140 (+)	312	Protein_2999	glycosyltransferase family 9 protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=937134 AAH690_RS15185 WP_000644904.1 3105705..3106730(-) (cytR) [Escherichia coli strain IH5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=937134 AAH690_RS15185 WP_000644904.1 3105705..3106730(-) (cytR) [Escherichia coli strain IH5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628