Detailed information NTG0937015

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: V5G00_RS10955
• Genome accession: NZ_CP145080
• Coordinates: 2093894..2095147 (+)
• Length: 417 a.a.
• NCBI ID: WP_003687004.1
• Uniprot ID: A0AB74EGQ8
• Organism: Neisseria gonorrhoeae strain WHO_E_2024
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2088894..2100147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5G00_RS10935 (V5G00_10970)	-	2089644..2090645 (+)	1002	WP_003686999.1	thiamine ABC transporter substrate-binding protein	-
V5G00_RS10940 (V5G00_10975)	-	2090739..2091587 (+)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
V5G00_RS10945 (V5G00_10980)	-	2091614..2092096 (+)	483	WP_003694396.1	CinA family protein	-
V5G00_RS10950 (V5G00_10985)	msrAB	2092180..2093748 (-)	1569	WP_003687002.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
V5G00_RS10955 (V5G00_10990)	pilA	2093894..2095147 (+)	1254	WP_003687004.1	signal recognition particle-docking protein FtsY	Machinery gene
V5G00_RS10960 (V5G00_10995)	-	2095412..2096209 (-)	798	WP_353426076.1	opacity family porin	-
V5G00_RS10965 (V5G00_11000)	-	2096753..2097273 (-)	521	Protein_2121	pilin	-
V5G00_RS10970 (V5G00_11005)	-	2098329..2098649 (-)	321	Protein_2122	pilin	-
V5G00_RS10975 (V5G00_11010)	-	2098710..2099093 (-)	384	Protein_2123	pilin	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44389.74 Da
• Isoelectric Point: 4.8123

>NTDB_id=937015 V5G00_RS10955 WP_003687004.1 2093894..2095147(+) (pilA) [Neisseria gonorrhoeae strain WHO_E_2024]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=937015 V5G00_RS10955 WP_003687004.1 2093894..2095147(+) (pilA) [Neisseria gonorrhoeae strain WHO_E_2024]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.76	100	0.998