Detailed information NTG0936962

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: V5G03_RS09035
• Genome accession: NZ_CP145077
• Coordinates: 1732336..1733589 (-)
• Length: 417 a.a.
• NCBI ID: WP_047920694.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain WHO_G_2024
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1727336..1738589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5G03_RS09010 (V5G03_09020)	-	1727488..1727823 (+)	336	Protein_1751	pilin	-
V5G03_RS09015 (V5G03_09025)	-	1728288..1728686 (+)	399	Protein_1752	pilin	-
V5G03_RS09020 (V5G03_09035)	lpxC	1729188..1730111 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
V5G03_RS09025 (V5G03_09040)	-	1730239..1730627 (+)	389	Protein_1754	pilin	-
V5G03_RS09030 (V5G03_09045)	-	1731254..1732045 (+)	792	Protein_1755	opacity family porin	-
V5G03_RS09035 (V5G03_09050)	pilA	1732336..1733589 (-)	1254	WP_047920694.1	signal recognition particle-docking protein FtsY	Machinery gene
V5G03_RS09040 (V5G03_09055)	msrAB	1733735..1735303 (+)	1569	WP_003687002.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
V5G03_RS09045 (V5G03_09060)	-	1735387..1735869 (-)	483	WP_003694396.1	CinA family protein	-
V5G03_RS09050 (V5G03_09065)	-	1735896..1736744 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
V5G03_RS09055 (V5G03_09070)	-	1736838..1737839 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44317.68 Da
• Isoelectric Point: 4.8618

>NTDB_id=936962 V5G03_RS09035 WP_047920694.1 1732336..1733589(-) (pilA) [Neisseria gonorrhoeae strain WHO_G_2024]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMDATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=936962 V5G03_RS09035 WP_047920694.1 1732336..1733589(-) (pilA) [Neisseria gonorrhoeae strain WHO_G_2024]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGATGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.76	100	0.998