Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   V5G11_RS00590 Genome accession   NZ_CP145071
Coordinates   129432..131474 (+) Length   680 a.a.
NCBI ID   WP_082288654.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain WHO_J_2024     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 124432..136474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G11_RS00565 (V5G11_00565) - 124917..125546 (+) 630 WP_003687375.1 response regulator transcription factor -
  V5G11_RS00570 (V5G11_00570) - 125628..126877 (+) 1250 Protein_111 ATP-binding protein -
  V5G11_RS00575 (V5G11_00575) rng 126912..128405 (-) 1494 WP_003687377.1 ribonuclease G -
  V5G11_RS00580 (V5G11_00580) grxC 128624..128881 (+) 258 WP_003687379.1 glutaredoxin 3 -
  V5G11_RS00585 (V5G11_00585) secB 128903..129346 (+) 444 WP_003687381.1 protein-export chaperone SecB -
  V5G11_RS00590 (V5G11_00590) recG 129432..131474 (+) 2043 WP_082288654.1 ATP-dependent DNA helicase RecG Machinery gene
  V5G11_RS00595 (V5G11_00595) argC 132068..133111 (-) 1044 WP_050164058.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  V5G11_RS00600 (V5G11_00600) - 133108..133389 (-) 282 WP_002221438.1 hypothetical protein -
  V5G11_RS00605 (V5G11_00605) - 133641..134795 (+) 1155 WP_003690582.1 cupin domain-containing protein -
  V5G11_RS00610 (V5G11_00610) - 134804..135031 (+) 228 WP_003687394.1 hypothetical protein -
  V5G11_RS00615 (V5G11_00615) - 135106..135378 (+) 273 WP_226888059.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74808.79 Da        Isoelectric Point: 7.8842

>NTDB_id=936832 V5G11_RS00590 WP_082288654.1 129432..131474(+) (recG) [Neisseria gonorrhoeae strain WHO_J_2024]
MMSPETQKQLKITDASAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLGRLKLPRLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTA
AALRGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVCLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLSIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPEPNIGLVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAGESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=936832 V5G11_RS00590 WP_082288654.1 129432..131474(+) (recG) [Neisseria gonorrhoeae strain WHO_J_2024]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGCTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGTCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATT
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCATTTTTACGCCAGCCATCAGAAGCAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGATTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGCATCATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACCTTGCCTGATGCTTTATTAGGCCGTCTGAAGCTGCCGCGCCTTGC
CGAAAGCCTGCGCCTTTTGCATTCGCCGCCGCCGAGTTTCACTATTCATCAACTTTCAGACGGCACGCTGCCGGCGTGGC
AGCGGCTCAAATTCGACGAACTTTTGGCGCAACAGTTGTCCATGCGTTTGGCGCGGCAGAAGCGCGTCAGCGGCACGGCG
GCGGCATTGCGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCACAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCA
AAACCATCGTCGCCGCCTTATCCGCGCTGACCGCCATCGAATCAGGCGCGCAAGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAGCACTTCATCAAGTTCAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCTGCCTTTTTGGCAGTTT
GCGCAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGAGCATTGTGGACGAACAGCACCGTTTCGGCGTTGCACAACGCCTC
GCACTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACACCCATCCCGCGCACGCTCGCCATGAGTTT
CTTCGCTGACTTGGACGTATCCGTCATCGACGAATTGCCGCCCGGGCGCACTCCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCATATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACCCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAAGCCGAAGTCATGGCGGAATTTGCCGCAGGCCGTCTGAACGTCT
TGGTCGCCACCACCGTTATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGGGGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACC
TCAATATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGCTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAACCGCCCCGATGCTGATTGAACAAAACCCTGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGTTATTTGGGTGTGTGA

Domains

Predicted by InterproScan.

RecG wedge domain (RecG_wedge)

(13-164)

Helicase conserved C-terminal domain (Helicase_C)

(469-575)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

DEAD/DEAH box helicase (DEAD)

(262-421)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

97.647

100

0.976