Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACEPM2_RS03445 Genome accession   NZ_CP168735
Coordinates   714315..714782 (+) Length   155 a.a.
NCBI ID   WP_016723446.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain RUN3223     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 709315..719782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEPM2_RS03420 (ACEPM2_03420) - 709450..710289 (-) 840 WP_011000620.1 YgcG family protein -
  ACEPM2_RS03425 (ACEPM2_03425) - 710302..710928 (-) 627 WP_016723449.1 LemA family protein -
  ACEPM2_RS03430 (ACEPM2_03430) dapA 711312..712226 (+) 915 WP_011000622.1 4-hydroxy-tetrahydrodipicolinate synthase -
  ACEPM2_RS03435 (ACEPM2_03435) hemL 712329..713630 (-) 1302 WP_011000623.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ACEPM2_RS03440 (ACEPM2_03440) - 713842..714024 (+) 183 WP_003261842.1 rubredoxin -
  ACEPM2_RS03445 (ACEPM2_03445) pilG 714315..714782 (+) 468 WP_016723446.1 response regulator Regulator
  ACEPM2_RS03450 (ACEPM2_03450) pilH 714814..715182 (+) 369 WP_003269243.1 response regulator Machinery gene
  ACEPM2_RS03455 (ACEPM2_03455) - 715241..715786 (+) 546 WP_011000625.1 chemotaxis protein CheW -
  ACEPM2_RS03460 (ACEPM2_03460) - 716032..718263 (+) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 16767.51 Da        Isoelectric Point: 8.2887

>NTDB_id=936826 ACEPM2_RS03445 WP_016723446.1 714315..714782(+) (pilG) [Ralstonia pseudosolanacearum strain RUN3223]
MVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCD
ILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 468 bp        

>NTDB_id=936826 ACEPM2_RS03445 WP_016723446.1 714315..714782(+) (pilG) [Ralstonia pseudosolanacearum strain RUN3223]
GTGGTCGCGCAACGCGAGAACATGATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCT
TGCCGGCCGTAAAGTGCTGGTGATCGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATT
GCCAGGTCGTGCTGGCCGAAGACGGGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGAC
ATCCTGATGCCCAAGCTGGACGGTTACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGT
CATGCTGTCGTCGCGCGACGGGGTGTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTT
TCTCGCGGGAAGCGCTGCTGGAGGCGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(32-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

76.774

0.419