Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | ACEPM4_RS12765 | Genome accession | NZ_CP168733 |
| Coordinates | 2731347..2731967 (+) | Length | 206 a.a. |
| NCBI ID | WP_011002444.1 | Uniprot ID | Q8XWE6 |
| Organism | Ralstonia pseudosolanacearum strain RUN5935 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2726347..2736967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPM4_RS12755 (ACEPM4_12755) | sodB | 2727574..2728152 (-) | 579 | WP_028853552.1 | superoxide dismutase [Fe] | - |
| ACEPM4_RS12760 (ACEPM4_12760) | xseA | 2728298..2729722 (-) | 1425 | WP_071508063.1 | exodeoxyribonuclease VII large subunit | - |
| ACEPM4_RS12765 (ACEPM4_12765) | exbB | 2731347..2731967 (+) | 621 | WP_011002444.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| ACEPM4_RS12770 (ACEPM4_12770) | - | 2731990..2732421 (+) | 432 | WP_011002445.1 | biopolymer transporter ExbD | - |
| ACEPM4_RS12775 (ACEPM4_12775) | lpxK | 2732437..2733486 (+) | 1050 | WP_011002446.1 | tetraacyldisaccharide 4'-kinase | - |
| ACEPM4_RS12780 (ACEPM4_12780) | - | 2733547..2733735 (+) | 189 | WP_003266270.1 | Trm112 family protein | - |
| ACEPM4_RS12785 (ACEPM4_12785) | kdsB | 2733754..2734560 (+) | 807 | WP_011002447.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACEPM4_RS12790 (ACEPM4_12790) | adk | 2734880..2735548 (+) | 669 | WP_011002448.1 | adenylate kinase | - |
| ACEPM4_RS12795 (ACEPM4_12795) | - | 2735706..2736464 (+) | 759 | WP_064478031.1 | 3-hydroxyacyl-CoA dehydrogenase | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 22288.15 Da Isoelectric Point: 9.3208
>NTDB_id=936788 ACEPM4_RS12765 WP_011002444.1 2731347..2731967(+) (exbB) [Ralstonia pseudosolanacearum strain RUN5935]
MFSIIQAAGWPIWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKATPEVVNTLEQGSPLGRVLAAALRH
VVLHPATTREAAKEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYN
TALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPRRG
MFSIIQAAGWPIWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKATPEVVNTLEQGSPLGRVLAAALRH
VVLHPATTREAAKEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYN
TALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPRRG
Nucleotide
Download Length: 621 bp
>NTDB_id=936788 ACEPM4_RS12765 WP_011002444.1 2731347..2731967(+) (exbB) [Ralstonia pseudosolanacearum strain RUN5935]
GTGTTTTCCATCATCCAAGCCGCCGGCTGGCCGATCTGGCCGCTGCTGATTGCCTCGGTGCTCGCCCTGGCGCTCATCAT
CGAACGCTTCGTCGCCTTGCAGCGCAAGAAGATCATTCCTCCCAAGGTGTATGACGAGGCCCTGGCGGTGGCACACCAGC
GCAAGGCGACGCCGGAAGTCGTGAACACGCTGGAACAGGGCTCGCCGCTGGGCCGCGTGCTGGCCGCCGCACTGCGCCAC
GTGGTGCTGCATCCGGCCACCACGCGCGAAGCCGCCAAGGAAGTGGTGGAAGAAGCCGGTCAGAACGTCGCCCACCGCCT
GGAGCGCTACCTGAACGCACTCGGCACCATCGCCTCGGTGGCGCCGCTGATGGGTCTGTTCGGCACCGTGGTCGGCATGA
TCGAGATCTTCGGCAGCCAGACCGCCGCCGGCACCAACCCGCAGACGCTCGCGCACGGCATCTCGGTCGCGCTGTACAAC
ACGGCGCTGGGCCTGGTGGTGGCCATCCCGACGCTGATCTTCTGGCGCTACTTCCGTGGCGTGGTCGACAGCTACGTGGT
CGAACTCGAGCACCTGTCCGCCACGTACCTCGACGCGATCCTGCCGCCGCGGCGCGGCTGA
GTGTTTTCCATCATCCAAGCCGCCGGCTGGCCGATCTGGCCGCTGCTGATTGCCTCGGTGCTCGCCCTGGCGCTCATCAT
CGAACGCTTCGTCGCCTTGCAGCGCAAGAAGATCATTCCTCCCAAGGTGTATGACGAGGCCCTGGCGGTGGCACACCAGC
GCAAGGCGACGCCGGAAGTCGTGAACACGCTGGAACAGGGCTCGCCGCTGGGCCGCGTGCTGGCCGCCGCACTGCGCCAC
GTGGTGCTGCATCCGGCCACCACGCGCGAAGCCGCCAAGGAAGTGGTGGAAGAAGCCGGTCAGAACGTCGCCCACCGCCT
GGAGCGCTACCTGAACGCACTCGGCACCATCGCCTCGGTGGCGCCGCTGATGGGTCTGTTCGGCACCGTGGTCGGCATGA
TCGAGATCTTCGGCAGCCAGACCGCCGCCGGCACCAACCCGCAGACGCTCGCGCACGGCATCTCGGTCGCGCTGTACAAC
ACGGCGCTGGGCCTGGTGGTGGCCATCCCGACGCTGATCTTCTGGCGCTACTTCCGTGGCGTGGTCGACAGCTACGTGGT
CGAACTCGAGCACCTGTCCGCCACGTACCTCGACGCGATCCTGCCGCCGCGGCGCGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
40.488 |
99.515 |
0.403 |