Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   V5F91_RS00600 Genome accession   NZ_CP145064
Coordinates   128111..130153 (+) Length   680 a.a.
NCBI ID   WP_353174329.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain WHO_S_2024     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 123111..135153
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5F91_RS00575 (V5F91_00580) - 123547..124224 (+) 678 WP_047920780.1 response regulator transcription factor -
  V5F91_RS00580 (V5F91_00585) - 124306..125557 (+) 1252 Protein_113 ATP-binding protein -
  V5F91_RS00585 (V5F91_00590) rng 125592..127085 (-) 1494 WP_003687377.1 ribonuclease G -
  V5F91_RS00590 (V5F91_00595) grxC 127304..127561 (+) 258 WP_003687379.1 glutaredoxin 3 -
  V5F91_RS00595 (V5F91_00600) secB 127582..128025 (+) 444 WP_003687381.1 protein-export chaperone SecB -
  V5F91_RS00600 (V5F91_00605) recG 128111..130153 (+) 2043 WP_353174329.1 ATP-dependent DNA helicase RecG Machinery gene
  V5F91_RS00605 (V5F91_00610) argC 130747..131790 (-) 1044 WP_003687386.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  V5F91_RS00610 (V5F91_00615) - 131787..132080 (-) 294 WP_002258326.1 hypothetical protein -
  V5F91_RS00615 (V5F91_00620) - 132332..133486 (+) 1155 WP_003690582.1 cupin domain-containing protein -
  V5F91_RS00620 (V5F91_00625) - 133495..133722 (+) 228 WP_003696696.1 hypothetical protein -
  V5F91_RS00625 (V5F91_00630) - 133797..134069 (+) 273 WP_353174332.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74834.83 Da        Isoelectric Point: 7.8842

>NTDB_id=936736 V5F91_RS00600 WP_353174329.1 128111..130153(+) (recG) [Neisseria gonorrhoeae strain WHO_S_2024]
MMSPETQKQLKITDASAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLGRLKLPRLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTA
AALRGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVCLFGSLRKKPKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLSIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPEPNIGLVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAGESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=936736 V5F91_RS00600 WP_353174329.1 128111..130153(+) (recG) [Neisseria gonorrhoeae strain WHO_S_2024]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGCTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGTCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATT
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAGCAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGATTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGCATCATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACCTTGCCTGATGCTTTATTAGGCCGTCTGAAGCTGCCGCGCCTTGC
CGAAAGCCTGCGCCTTTTGCATTCGCCGCCGCCGAGTTTCACTATTCATCAACTTTCAGACGGCACGCTGCCGGCGTGGC
AGCGGCTCAAATTCGACGAACTTTTGGCGCAACAGTTGTCCATGCGTTTGGCGCGGCAGAAGCGCGTCAGCGGCACGGCG
GCGGCATTGCGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCACAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCA
AAACCATCGTCGCCGCCTTATCCGCGCTGACCGCCATCGAATCAGGCGCGCAAGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAGCACTTCATCAAGTTCAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCTGCCTTTTTGGCAGTTT
GCGCAAAAAACCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGAGCATTGTGGACGAACAGCACCGTTTCGGCGTTGCACAACGCCTC
GCACTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACACCCATCCCGCGCACGCTCGCCATGAGCTT
CTTCGCTGACTTGGACGTATCCGTCATCGACGAATTGCCGCCCGGGCGCACGCCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCATATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACCCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTCATGGCGGAATTTGCCGCAGGCCGTCTGAACGTCT
TGGTTGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAACGCCGCCCTGATGGTGATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGGGGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAATATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGCTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAACCGCCCCGATGCTGATTGAACAAAACCCTGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGTTATTTGGGTGTGTGA

Domains

Predicted by InterproScan.

Helicase conserved C-terminal domain (Helicase_C)

(469-575)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

RecG wedge domain (RecG_wedge)

(13-164)

DEAD/DEAH box helicase (DEAD)

(262-421)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

97.5

100

0.975