Detailed information NTG0936428

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: V5G06_RS09015
• Genome accession: NZ_CP145048
• Coordinates: 1735313..1736566 (-)
• Length: 417 a.a.
• NCBI ID: WP_003696286.1
• Uniprot ID: A0AB74ETB0
• Organism: Neisseria gonorrhoeae strain WHO_K_2024
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1730313..1741566

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5G06_RS08990 (V5G06_09010)	lpxC	1730698..1731621 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
V5G06_RS08995 (V5G06_09015)	-	1731756..1732151 (+)	396	Protein_1747	pilin	-
V5G06_RS09000 (V5G06_09020)	-	1733207..1733709 (+)	503	Protein_1748	pilin	-
V5G06_RS09005 (V5G06_09025)	-	1734354..1735049 (+)	696	WP_048596847.1	opacity family porin	-
V5G06_RS09010 (V5G06_09030)	-	1735063..1735236 (+)	174	WP_162488833.1	hypothetical protein	-
V5G06_RS09015 (V5G06_09035)	pilA	1735313..1736566 (-)	1254	WP_003696286.1	signal recognition particle-docking protein FtsY	Machinery gene
V5G06_RS09020 (V5G06_09040)	msrAB	1736712..1738280 (+)	1569	WP_003696503.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
V5G06_RS09025 (V5G06_09045)	-	1738364..1738846 (-)	483	WP_003694396.1	CinA family protein	-
V5G06_RS09030 (V5G06_09050)	-	1738873..1739721 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
V5G06_RS09035 (V5G06_09055)	-	1739815..1740816 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44331.70 Da
• Isoelectric Point: 4.8647

>NTDB_id=936428 V5G06_RS09015 WP_003696286.1 1735313..1736566(-) (pilA) [Neisseria gonorrhoeae strain WHO_K_2024]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=936428 V5G06_RS09015 WP_003696286.1 1735313..1736566(-) (pilA) [Neisseria gonorrhoeae strain WHO_K_2024]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	100	100	1