Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8891_RS03060 | Genome accession | NZ_AP028367 |
| Coordinates | 589389..589772 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10642 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 584389..594772
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8891_RS03040 (B10642_05990) | - | 584468..586402 (-) | 1935 | WP_052804230.1 | RNB domain-containing ribonuclease | - |
| R8891_RS03045 (B10642_06000) | ilvC | 586521..587543 (+) | 1023 | WP_032581040.1 | ketol-acid reductoisomerase | - |
| R8891_RS03050 (B10642_06010) | - | 587547..588629 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| R8891_RS03055 (B10642_06020) | dprA | 588619..589392 (+) | 774 | WP_002859984.1 | DNA-processing protein DprA | Machinery gene |
| R8891_RS03060 (B10642_06030) | dprB | 589389..589772 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8891_RS03065 (B10642_06040) | - | 589801..590640 (+) | 840 | WP_317719104.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8891_RS03070 (B10642_06050) | msrA | 590815..591312 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8891_RS03075 (B10642_06060) | ppa | 591354..591872 (-) | 519 | WP_002852138.1 | inorganic diphosphatase | - |
| R8891_RS03080 (B10642_06070) | adk | 591882..592460 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8891_RS03085 (B10642_06080) | aspS | 592457..594208 (-) | 1752 | WP_032586472.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=93626 R8891_RS03060 WP_002852281.1 589389..589772(+) (dprB) [Campylobacter jejuni strain BCH-10642]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=93626 R8891_RS03060 WP_002852281.1 589389..589772(+) (dprB) [Campylobacter jejuni strain BCH-10642]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |