Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACEPOS_RS10670 Genome accession   NZ_CP168497
Coordinates   2163899..2164639 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain J23     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2158899..2169639
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEPOS_RS10645 (ACEPOS_10645) yhaM 2159317..2160258 (+) 942 WP_020977381.1 3'-5' exoribonuclease YhaM -
  ACEPOS_RS10650 (ACEPOS_10650) - 2160379..2161341 (-) 963 WP_000782119.1 foldase protein PrsA -
  ACEPOS_RS10655 (ACEPOS_10655) - 2161546..2162103 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  ACEPOS_RS10660 (ACEPOS_10660) - 2162836..2163201 (-) 366 WP_020977380.1 YtxH domain-containing protein -
  ACEPOS_RS10665 (ACEPOS_10665) - 2163343..2163765 (-) 423 WP_000004981.1 HIT family protein -
  ACEPOS_RS10670 (ACEPOS_10670) pptA 2163899..2164639 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  ACEPOS_RS10675 (ACEPOS_10675) - 2164632..2165855 (+) 1224 WP_029753554.1 ABC transporter permease -
  ACEPOS_RS10680 (ACEPOS_10680) traP 2165979..2166482 (-) 504 WP_000737983.1 signal transduction protein TRAP -
  ACEPOS_RS10685 (ACEPOS_10685) - 2166668..2166754 (+) 87 WP_031875110.1 hypothetical protein -
  ACEPOS_RS10690 (ACEPOS_10690) hemE 2166744..2167781 (+) 1038 WP_000233531.1 uroporphyrinogen decarboxylase -
  ACEPOS_RS10695 (ACEPOS_10695) hemH 2167839..2168762 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=936113 ACEPOS_RS10670 WP_000216874.1 2163899..2164639(+) (pptA) [Staphylococcus aureus strain J23]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=936113 ACEPOS_RS10670 WP_000216874.1 2163899..2164639(+) (pptA) [Staphylococcus aureus strain J23]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTAAATGGCGCCGGTAAGAGTACGACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACCGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545