Detailed information NTG0935901

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: V5G14_RS09425
• Genome accession: NZ_CP145017
• Coordinates: 1794612..1795865 (-)
• Length: 417 a.a.
• NCBI ID: WP_047921365.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain WHO_Y_2024
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1789612..1800865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5G14_RS09395 (V5G14_09410)	-	1789679..1789969 (+)	291	Protein_1828	pilin	-
V5G14_RS09400 (V5G14_09415)	-	1790429..1790824 (+)	396	Protein_1829	pilin	-
V5G14_RS09405 (V5G14_09420)	-	1791362..1791760 (+)	399	Protein_1830	pilin	-
V5G14_RS09410 (V5G14_09425)	-	1791964..1792350 (+)	387	Protein_1831	pilin	-
V5G14_RS09415 (V5G14_09435)	lpxC	1792853..1793776 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
V5G14_RS09420 (V5G14_09440)	-	1793905..1794309 (+)	405	Protein_1833	pilin	-
V5G14_RS09425 (V5G14_09445)	pilA	1794612..1795865 (-)	1254	WP_047921365.1	signal recognition particle-docking protein FtsY	Machinery gene
V5G14_RS09430 (V5G14_09450)	msrAB	1796011..1797579 (+)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
V5G14_RS09435 (V5G14_09455)	-	1797663..1798148 (-)	486	WP_003687001.1	CinA family protein	-
V5G14_RS09440 (V5G14_09460)	-	1798174..1799022 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
V5G14_RS09445 (V5G14_09465)	-	1799116..1800117 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44431.78 Da
• Isoelectric Point: 4.7680

>NTDB_id=935901 V5G14_RS09425 WP_047921365.1 1794612..1795865(-) (pilA) [Neisseria gonorrhoeae strain WHO_Y_2024]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQTAGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=935901 V5G14_RS09425 WP_047921365.1 1794612..1795865(-) (pilA) [Neisseria gonorrhoeae strain WHO_Y_2024]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGAACGCAACAATGTAACCGTCATTTCACAAACTGCGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATCATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.281	100	0.993