Detailed information NTG0935580

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: PGK76_RS07905
• Genome accession: NZ_CP168322
• Coordinates: 1684817..1687582 (-)
• Length: 921 a.a.
• NCBI ID: WP_154468454.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain RCAD0866
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1679817..1692582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PGK76_RS07885 (PGK76_007885)	-	1680300..1681016 (+)	717	WP_154468458.1	DUF3822 family protein	-
PGK76_RS07890 (PGK76_007890)	-	1681042..1681602 (+)	561	WP_154468457.1	RsmD family RNA methyltransferase	-
PGK76_RS07895 (PGK76_007895)	kdsA	1681751..1682560 (+)	810	WP_154468456.1	3-deoxy-8-phosphooctulonate synthase	-
PGK76_RS07900 (PGK76_007900)	-	1682582..1684759 (+)	2178	WP_154468455.1	TonB-dependent siderophore receptor	-
PGK76_RS07905 (PGK76_007905)	uvrA	1684817..1687582 (-)	2766	WP_154468454.1	excinuclease ABC subunit UvrA	Machinery gene
PGK76_RS07910 (PGK76_007910)	eptA	1687630..1689153 (-)	1524	WP_154468453.1	phosphoethanolamine--lipid A transferase EptA	-
PGK76_RS07915 (PGK76_007915)	-	1689140..1689967 (-)	828	WP_154468452.1	phosphatase PAP2 family protein	-
PGK76_RS07920 (PGK76_007920)	-	1690095..1690748 (-)	654	WP_014938993.1	hypothetical protein	-

Sequence

Protein

• Length: 921 a.a.
• Molecular weight: 103353.35 Da
• Isoelectric Point: 5.9736

>NTDB_id=935580 PGK76_RS07905 WP_154468454.1 1684817..1687582(-) (uvrA) [Riemerella anatipestifer strain RCAD0866]
MDIKNNIFVKNAHLNNLKNIDVLIPKNKLVVVTGVSGSGKSSLAFDTIYAEGQRRYVESLSSYARQFLGRLEKPKIDDIK
GLAPSIAIQQKVISSNPRSTVGTSTEIYDYLKLLFARVGRTYSPVSGDEVKKDSISDVISYIEENPNQEFLLTAPLSFAD
GDFKSLLNTLKVSGFTRLEINGNIAEIEDLESFGFVPEKEMSLNLVIDRFVYEDDEYFLQRLADSIQTAFYEGHGSCALK
NIETQNIKHFSNLFEADGISFLEPNLHFFSFNNPYGACPTCEGYGKVVGIDEDLVIPNKRLSIYEDAVACWKGETMSEWK
MHFIKNAPDFPIHKPYFELTKEQKQLLWRGTGAKNFPCIDQFFHMLEENLYKIQYRVMLSRYRGKTKCSDCEGLRLRKET
EWVKVGGHNIQSLMELPLDELLPLIKNLKLTKHEQEIVKRLLYEITTRLEFLLKVGLGYLTLNRTSNTLSGGESQRINLA
TSLGSSLVGSIYILDEPSIGLHSQDTENLIEVLKNLRDLGNTVIVVEHDEDIMRAADYIIDIGPEAGFLGGELVFAGDFK
DLKEADTLTSKYLTGRLEIAVPKRRRRAKSFINIKGARQNNLKNIDVDIPLENLVVVTGVSGSGKSTLMKEVLANDIQIQ
LGMGGKKGDYDYVEFPPQLVKHIELIDQNPIGKSSRSNPVTYLKAYDDIRDLFAKQRHSKTMNLKPKHFSFNVDGGRCDE
CKGEGVITISMQFMADVELECEHCKGARFKSEILEVKFDEKNIADILQMTVDEAIDFFSDNKQDKIVTKLKPLQEVGLGY
LKLGQSSSTLSGGEAQRVKLASFLVKGVTTEKTLFIFDEPSTGLHFHDIQKLLTSLQALIELGHSVVVIEHQPDIIKSAD
WIIDIGPNAGKYGGEVVFAGTPEDLAKDKKSKTAKFVAEKL

Nucleotide

• Length: 2766 bp

>NTDB_id=935580 PGK76_RS07905 WP_154468454.1 1684817..1687582(-) (uvrA) [Riemerella anatipestifer strain RCAD0866]
ATGGATATTAAAAATAATATTTTTGTTAAAAACGCACATCTTAACAACCTTAAAAATATAGATGTTCTTATACCTAAAAA
CAAACTAGTCGTAGTAACAGGCGTGTCTGGTAGTGGGAAATCGTCTTTAGCCTTTGATACTATTTATGCCGAAGGGCAAA
GGCGTTATGTGGAGAGTTTAAGCTCCTATGCTAGACAGTTTTTGGGGCGTTTAGAGAAACCAAAGATAGACGATATTAAA
GGCTTAGCACCATCTATCGCCATACAACAGAAAGTAATTTCTTCTAATCCAAGGTCCACAGTAGGAACTTCCACCGAAAT
TTACGATTATCTTAAATTATTGTTTGCTCGTGTGGGGCGTACCTATTCACCTGTATCTGGTGATGAGGTGAAAAAGGACA
GCATTTCTGATGTTATTTCTTATATAGAAGAAAATCCTAATCAAGAGTTTCTACTCACAGCACCGCTTTCGTTTGCTGAT
GGTGATTTTAAATCACTATTAAATACATTGAAAGTTTCAGGATTTACTAGGTTAGAAATTAACGGAAATATCGCTGAAAT
AGAAGATTTAGAGAGTTTTGGCTTCGTTCCTGAAAAAGAGATGTCGCTTAATTTGGTTATTGACCGCTTTGTTTACGAGG
ACGATGAGTATTTTCTGCAACGCTTAGCAGATTCTATCCAAACGGCTTTCTACGAGGGGCACGGCTCTTGTGCTTTAAAA
AATATTGAAACTCAAAATATAAAACACTTTTCCAATCTTTTTGAGGCTGATGGGATTTCTTTTTTAGAACCAAATCTTCA
TTTTTTCAGTTTTAATAATCCTTACGGAGCGTGTCCTACTTGCGAGGGTTATGGTAAAGTGGTTGGGATAGACGAAGACT
TGGTAATTCCTAATAAAAGGCTTTCGATTTACGAAGATGCTGTCGCTTGTTGGAAAGGAGAAACGATGAGCGAGTGGAAA
ATGCACTTTATCAAAAACGCTCCAGATTTTCCAATCCATAAACCCTATTTTGAACTTACTAAAGAGCAAAAACAACTCTT
ATGGAGAGGAACGGGAGCTAAAAACTTTCCGTGTATAGACCAGTTTTTCCATATGCTGGAGGAGAATTTGTATAAGATAC
AATATCGAGTGATGCTCTCTCGTTACAGAGGTAAAACCAAATGTTCCGACTGCGAAGGTCTAAGATTAAGAAAAGAAACC
GAATGGGTAAAAGTGGGAGGGCATAATATACAATCGTTAATGGAATTACCATTGGACGAACTTCTGCCTTTAATTAAGAA
CCTTAAACTTACCAAACACGAGCAAGAAATTGTTAAAAGGCTACTCTACGAAATTACTACTAGACTAGAGTTTTTGTTAA
AAGTAGGCTTGGGATATTTAACGCTAAACCGTACTTCTAATACTTTGTCAGGTGGGGAAAGTCAAAGGATTAACTTAGCG
ACTAGCTTGGGGAGTTCTTTGGTTGGGTCTATTTATATTTTGGACGAGCCTTCCATTGGGCTACATTCACAGGATACCGA
GAATTTAATAGAAGTTCTAAAGAATTTAAGAGATTTAGGTAATACCGTTATTGTTGTGGAACACGATGAGGATATTATGC
GTGCCGCAGATTATATTATAGATATAGGTCCAGAAGCCGGTTTCCTTGGGGGAGAGCTGGTCTTCGCAGGCGATTTTAAA
GACCTCAAAGAAGCCGATACTTTAACTTCTAAATACCTTACAGGAAGGCTAGAAATAGCAGTGCCAAAAAGGAGAAGGAG
AGCTAAATCGTTCATCAATATCAAAGGAGCAAGACAAAATAACCTTAAAAATATAGATGTTGATATTCCTTTGGAGAATT
TGGTGGTGGTTACGGGAGTGTCGGGTTCTGGTAAATCTACATTGATGAAAGAGGTTTTGGCTAACGATATTCAAATCCAG
TTAGGAATGGGAGGCAAAAAAGGCGACTATGATTATGTAGAATTTCCGCCTCAACTTGTGAAGCATATCGAATTGATAGA
CCAGAATCCTATCGGAAAATCGTCTAGGTCTAACCCGGTAACCTATCTTAAGGCTTATGATGATATTAGAGATTTGTTCG
CTAAGCAACGTCATTCTAAAACTATGAATTTAAAGCCTAAGCACTTTTCGTTTAATGTAGATGGTGGGAGATGTGATGAG
TGTAAAGGAGAGGGCGTTATTACCATATCTATGCAATTTATGGCAGATGTGGAACTAGAATGTGAACACTGCAAAGGAGC
AAGATTTAAGTCCGAAATATTGGAAGTTAAGTTTGATGAGAAAAATATTGCAGATATTCTACAAATGACGGTAGATGAAG
CGATTGATTTCTTTAGTGATAATAAACAAGATAAAATAGTTACTAAACTAAAACCATTGCAAGAGGTAGGTCTAGGCTAT
CTTAAACTAGGACAAAGTTCTTCTACGCTTTCAGGTGGGGAAGCCCAAAGGGTAAAGTTGGCATCGTTTTTAGTAAAGGG
TGTAACTACGGAGAAAACGCTTTTTATTTTTGATGAACCTTCCACGGGGCTTCATTTTCATGATATACAGAAGTTATTAA
CCTCATTACAGGCACTTATAGAGTTGGGGCATTCTGTAGTGGTTATAGAGCATCAGCCAGATATTATTAAGTCAGCAGAT
TGGATCATAGATATAGGTCCTAATGCAGGTAAGTATGGCGGAGAAGTAGTTTTTGCTGGAACACCTGAGGATTTAGCAAA
AGATAAAAAATCCAAAACCGCTAAATTCGTAGCCGAAAAACTTTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (135-240)

• ABC transporter (ABC_tran) (602-841)

• UvrA DNA-binding domain (UvrA_DNA-bind) (291-356)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	44.05	100	0.458
uvrA	Streptococcus pneumoniae TIGR4	44.05	100	0.458
uvrA	Streptococcus pneumoniae D39	44.05	100	0.458