Detailed information NTG0935577

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: PGK76_RS06090
• Genome accession: NZ_CP168322
• Coordinates: 1298910..1301735 (+)
• Length: 941 a.a.
• NCBI ID: WP_154467841.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain RCAD0866
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1293910..1306735

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PGK76_RS06075 (PGK76_006075)	-	1294317..1295513 (+)	1197	WP_004918907.1	aminopeptidase C	-
PGK76_RS06080 (PGK76_006080)	rpsA	1295731..1297512 (-)	1782	WP_154468646.1	30S ribosomal protein S1	-
PGK76_RS06085 (PGK76_006085)	-	1297843..1298787 (+)	945	WP_004918915.1	SPFH domain-containing protein	-
PGK76_RS06090 (PGK76_006090)	uvrA	1298910..1301735 (+)	2826	WP_154467841.1	excinuclease ABC subunit UvrA	Machinery gene
PGK76_RS06095 (PGK76_006095)	-	1301760..1302344 (+)	585	WP_154468645.1	outer membrane beta-barrel protein	-
PGK76_RS06100 (PGK76_006100)	purH	1302364..1303878 (+)	1515	WP_154468644.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
PGK76_RS06105 (PGK76_006105)	-	1304145..1304669 (-)	525	WP_154468643.1	DUF922 domain-containing protein	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 105399.24 Da
• Isoelectric Point: 7.8642

>NTDB_id=935577 PGK76_RS06090 WP_154467841.1 1298910..1301735(+) (uvrA) [Riemerella anatipestifer strain RCAD0866]
MMKNRDFIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARQFLGGLERPDVDKI
EGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVSTAYSLETGKKLQSYTEEQILETIKEQYQNEKVLLLAPLVK
ARKGHYHELFVQLAKKGYSQARIDGTLQDIEYDLKLDRYKTHDIEVVIDRWVIGETASEARMQKSLSTALQMGGGVVMVQ
KYNSEEFQYFSKDLMDTATGQALPLPEPNTFSFNSPKGSCPHCKGLGTVKKINPDYLVTEPTLPFQSALLPLETYKFSKW
ALSQIKSILELFELSLLTPFNKIPKEALDYIYYGCEKEFVKDLKHAGISKKTKINFEGLIPHLEKVIEDKENYGATQVER
EFTVEEICTDCNGTRLKPESLAFKIEGKTIAEVNAMSLLDLKDWLSEIKNSFSEKNKIIAHEILKEIETRLGFLLDVGLE
YLSLSRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKSLRDLGNSVLVVEHDKDMILEADE
VLDIGPKAGKYGGKVLWQGSPKDLIKADTITADYLTGRRKIEIPEKRREGNGNSIVLKGATGNNLKNVTLKIPLGKMVVV
TGISGSGKSSLINGTLYPILNRHFYRAVQEPLPYKKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGVFSDIRTLFANLP
ESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEVRYKGKSISDVLDMTIDEAVEF
FQPIPKIYSKVKTLQEVGLGYITLGQQSTTLSGGEAQRVKLATELSKKQTGKTLYILDEPTTGLHFEDVKILMEVIQKLV
DLGNSFIIIEHNMDVIKLADHIIDVGPEGGKNGGSIIAEGTPEEIIKNKKSITGKFLKKEM

Nucleotide

• Length: 2826 bp

>NTDB_id=935577 PGK76_RS06090 WP_154467841.1 1298910..1301735(+) (uvrA) [Riemerella anatipestifer strain RCAD0866]
ATGATGAAAAATAGAGATTTCATAGAGGTCTATGGTGCTAGAGAGCATAACCTAAAAAACATTGATGTTAAAATCCCTCG
TAACGAGCTAGTCGTTATTACAGGGCTATCAGGAAGTGGGAAATCTTCTTTAGCATTTGATACTATTTTTGCGGAAGGAC
AAAGGCGTTATATAGAAACATTTTCCGCCTATGCTCGGCAGTTTCTAGGTGGATTAGAACGCCCCGATGTTGATAAAATA
GAAGGACTTTCCCCTGTTATCGCTATTGAACAAAAAACCACTAATAAAAACCCTCGTTCTACCGTAGGGACGGTTACAGA
ACTTTATGATTTTCTCAGACTTCTATTTGCTAGAGTTTCCACAGCTTATTCCTTAGAAACAGGTAAAAAGCTACAAAGCT
ATACCGAAGAGCAAATTTTAGAAACCATCAAAGAACAATATCAGAATGAAAAAGTATTGCTTCTAGCACCACTAGTAAAG
GCTAGAAAGGGGCATTATCACGAGCTTTTTGTACAATTAGCAAAAAAAGGATATTCCCAAGCAAGAATAGATGGCACTTT
GCAAGATATAGAGTACGACCTTAAACTAGACCGATACAAAACCCACGATATAGAAGTAGTTATAGACCGTTGGGTCATAG
GCGAAACCGCATCTGAAGCTAGAATGCAAAAATCACTTTCCACAGCTTTGCAGATGGGGGGCGGTGTGGTTATGGTTCAA
AAATATAATTCGGAAGAGTTTCAGTATTTTTCTAAAGATTTAATGGATACCGCCACAGGACAGGCTCTACCATTACCAGA
ACCAAATACTTTTTCGTTCAATTCTCCTAAAGGGAGTTGTCCTCATTGTAAAGGTTTGGGAACTGTAAAAAAAATCAATC
CTGATTATCTAGTTACCGAGCCTACTCTACCCTTTCAGTCGGCACTATTACCATTAGAAACTTATAAATTTAGTAAGTGG
GCTTTATCCCAAATTAAAAGCATACTAGAGTTATTTGAGCTTAGCTTACTAACACCATTCAACAAAATTCCTAAAGAAGC
CTTAGACTACATCTATTACGGTTGTGAAAAAGAGTTTGTAAAAGATTTAAAACACGCAGGAATTTCCAAAAAAACTAAAA
TTAATTTTGAAGGGCTAATTCCTCATTTAGAAAAAGTTATAGAAGATAAAGAGAACTACGGTGCTACACAAGTGGAGCGA
GAGTTTACAGTAGAAGAAATCTGTACAGACTGTAACGGAACAAGATTAAAACCCGAAAGTTTAGCCTTTAAAATAGAAGG
TAAAACTATTGCTGAAGTTAATGCGATGAGCTTATTAGACTTAAAAGATTGGCTTTCGGAAATAAAAAATAGCTTCAGCG
AAAAAAACAAAATTATCGCCCACGAAATTTTAAAAGAGATAGAAACTCGTTTGGGCTTTTTATTAGACGTAGGGCTAGAA
TATCTTAGTCTTAGTAGAAGTAGTAAAACCCTTTCTGGAGGCGAATCCCAAAGGATTCGTTTGGCAACACAGATAGGCTC
GCAGTTGGTGAATGTCCTTTATATTTTAGACGAACCTTCTATTGGGCTTCACCAGAGAGATAACGAAAGACTCATCAACT
CTTTAAAAAGTTTACGAGATTTAGGAAACTCTGTTCTTGTGGTGGAACACGATAAGGATATGATTTTAGAAGCCGATGAA
GTGCTAGACATCGGACCTAAAGCTGGTAAGTATGGCGGAAAAGTCTTGTGGCAAGGCAGCCCAAAAGATTTAATAAAAGC
TGACACCATTACAGCAGACTACCTCACAGGAAGAAGAAAAATAGAAATCCCTGAAAAGAGAAGAGAAGGCAACGGTAACT
CGATTGTCCTCAAAGGAGCAACGGGCAATAATCTTAAAAATGTAACCCTAAAAATTCCTTTAGGGAAAATGGTAGTGGTT
ACGGGGATTTCAGGAAGTGGTAAGTCCTCACTGATTAACGGAACCCTCTACCCTATTCTCAACCGTCATTTCTATCGTGC
TGTGCAAGAGCCTCTACCATACAAAAAAATAGAAGGTATAGAGCATATAGACAAAATAGTAGATGTAGACCAAACGCCAA
TTGGTAGAACGCCTCGTTCTAATCCTGCCACTTATACAGGTGTGTTTTCGGATATTCGAACACTATTTGCTAACCTTCCA
GAAAGTAAAATCAGAGGTTATAAGGCAGGGAGATTTTCGTTTAATGTTAAAGGTGGACGCTGCGAAACTTGTCAAGGAGG
TGGATTGAAAGTGATTGAAATGAATTTCTTGCCTGATGTCTATGTGCATTGCGAAACTTGTAACGGCAAACGCTTTAATA
GAGAAACTTTAGAAGTAAGATATAAAGGTAAATCTATATCCGATGTCCTAGATATGACCATAGACGAAGCTGTGGAATTT
TTTCAGCCAATCCCAAAAATCTATTCTAAGGTGAAAACGCTACAAGAAGTAGGTTTAGGCTATATTACTTTAGGACAACA
GTCTACTACACTTTCGGGCGGAGAGGCTCAAAGAGTAAAATTAGCCACAGAACTCTCTAAAAAACAAACAGGTAAAACGC
TTTATATTTTAGATGAACCTACCACAGGACTGCATTTTGAAGATGTTAAGATTCTGATGGAGGTTATCCAAAAGCTAGTA
GATTTAGGAAACTCTTTTATCATTATTGAACATAATATGGACGTGATAAAACTTGCCGACCATATTATAGATGTAGGTCC
AGAAGGTGGTAAAAATGGAGGAAGTATCATCGCAGAAGGTACTCCAGAAGAAATTATAAAGAATAAAAAATCTATCACAG
GTAAATTTTTGAAAAAAGAAATGTAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-391)

• UvrA interaction domain (UvrA_inter) (135-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	51.907	100	0.521
uvrA	Streptococcus pneumoniae TIGR4	51.907	100	0.521
uvrA	Streptococcus pneumoniae D39	51.907	100	0.521