Detailed information NTG0935501

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: PG338_RS01315
• Genome accession: NZ_CP168321
• Coordinates: 292652..295477 (-)
• Length: 941 a.a.
• NCBI ID: WP_064964513.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain RCAD1242
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 287652..300477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PG338_RS01300 (PG338_001300)	-	289877..290410 (+)	534	WP_004918921.1	hypothetical protein	-
PG338_RS01305 (PG338_001305)	purH	290510..292024 (-)	1515	WP_004918920.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
PG338_RS01310 (PG338_001310)	-	292044..292628 (-)	585	WP_004918918.1	outer membrane beta-barrel protein	-
PG338_RS01315 (PG338_001315)	uvrA	292652..295477 (-)	2826	WP_064964513.1	excinuclease ABC subunit UvrA	Machinery gene
PG338_RS01320 (PG338_001320)	-	295601..296545 (-)	945	WP_004918915.1	SPFH domain-containing protein	-
PG338_RS01325 (PG338_001325)	rpsA	296876..298657 (+)	1782	WP_004918909.1	30S ribosomal protein S1	-
PG338_RS01330 (PG338_001330)	-	298875..300071 (-)	1197	WP_004918907.1	aminopeptidase C	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 105497.22 Da
• Isoelectric Point: 7.5093

>NTDB_id=935501 PG338_RS01315 WP_064964513.1 292652..295477(-) (uvrA) [Riemerella anatipestifer strain RCAD1242]
MMKNRDFIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARRFLGGLERPDVDKI
EGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVSTAYSLETGKKLQSYTEEQILETIKEQYQNEKVLLLAPLVK
ARKGHYHELFVQLAKKGYSQARIDGTLQDIEYDLKLDRYKTHDIEVVIDRWIIGETASEARMQKSLSTALQMGGGVVMVQ
KYNSEEFQYFSKDLMDTATGQALPLPEPNTFSFNSPKGSCPHCKGLGTVKKINPDYLVTEPTLPFQSALLPLETYKFSKW
ALSQIKSILELFDLNLQTPFNKIPKEALDYIYYGCDKEFVKDLKHAGISKKTKINFEGLIPHLEKVIEDKENYGATQVER
EFTVEEICTDCNGTRLKPESLAFKIEGKNIAEVNAMSLLDLKDWLSEIKNSFSEKNKIIAHEILKEIETRLGFLLDVGLE
YLSLSRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKSLRDLGNSVLVVEHDKDMILEADE
VLDIGPKAGKYGGKVLWQGSPKDLIKADTITADYLTGRRKIEIPEKRREGNGNEIVLKGATGNNLKNVTLKIPLGKMVVV
TGISGSGKSSLINGTLYPILNRHFYRAVQEPLPYEKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGVFSDIRTLFANLP
ESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEVRYKGKSISDVLDMTIDEAVEF
FQPIPKIYSKVKTLQEVGLGYITLGQQSTTLSGGEAQRVKLATELSKKQTGKTLYILDEPTTGLHFEDVKILMEVIQKLV
DLGNSFIIIEHNMDVIKLADHIIDVGPEGGKNGGSIVAEGTPEEIIKNKKSITGKFLKKEM

Nucleotide

• Length: 2826 bp

>NTDB_id=935501 PG338_RS01315 WP_064964513.1 292652..295477(-) (uvrA) [Riemerella anatipestifer strain RCAD1242]
ATGATGAAAAATAGAGATTTCATAGAGGTCTATGGTGCTAGAGAGCATAACTTAAAAAACATTGATGTTAAAATTCCTCG
TAACGAGTTAGTCGTTATTACAGGGCTATCAGGAAGTGGGAAATCTTCTTTAGCATTTGATACTATTTTTGCAGAAGGAC
AAAGGCGTTATATAGAAACATTTTCCGCCTATGCTCGGCGGTTTCTAGGTGGATTAGAACGCCCCGATGTTGATAAAATA
GAAGGACTTTCCCCTGTTATCGCTATTGAACAAAAAACCACTAATAAAAACCCTCGTTCTACCGTAGGGACGGTTACAGA
ACTTTATGATTTTCTCAGACTTCTATTTGCTAGAGTTTCCACAGCTTATTCCTTAGAAACAGGTAAAAAGCTACAAAGCT
ATACCGAAGAGCAAATTTTAGAAACCATCAAAGAACAATATCAGAATGAAAAAGTCTTGCTTCTAGCACCGCTAGTAAAG
GCTAGAAAGGGGCATTATCACGAGCTTTTTGTGCAATTAGCCAAAAAAGGATATTCCCAAGCAAGAATAGATGGCACTTT
GCAAGATATAGAATACGACCTTAAACTAGACCGATACAAAACCCACGATATAGAAGTAGTTATAGACCGTTGGATTATAG
GCGAAACCGCATCTGAAGCTAGGATGCAAAAATCACTTTCCACAGCTTTGCAGATGGGGGGTGGTGTGGTTATGGTTCAA
AAATATAATTCGGAAGAGTTTCAGTATTTTTCTAAAGATTTAATGGATACCGCCACAGGACAGGCTCTACCATTACCAGA
ACCAAATACTTTTTCGTTCAATTCTCCTAAAGGGAGTTGTCCTCATTGTAAAGGTTTGGGAACTGTAAAAAAAATCAATC
CTGATTATCTAGTTACCGAGCCTACTCTACCCTTTCAGTCGGCACTATTACCATTAGAAACTTATAAATTTAGTAAATGG
GCTTTATCTCAAATTAAAAGCATTCTAGAATTATTTGACCTTAACCTACAAACACCATTCAACAAAATTCCTAAAGAAGC
CTTAGACTACATCTATTACGGTTGTGATAAAGAGTTTGTAAAAGATTTAAAACACGCTGGAATTTCCAAAAAAACTAAAA
TTAACTTTGAAGGGCTAATCCCTCATTTAGAAAAAGTTATAGAAGATAAAGAGAACTACGGTGCTACACAAGTGGAACGA
GAGTTTACAGTAGAAGAAATCTGTACGGACTGTAACGGAACAAGATTAAAACCCGAAAGTTTAGCCTTTAAAATAGAAGG
TAAGAATATAGCTGAAGTTAATGCGATGAGCTTATTAGACTTAAAAGATTGGCTTTCGGAAATAAAAAATAGCTTTAGCG
AAAAAAACAAAATTATCGCCCACGAAATTTTAAAAGAGATAGAAACTCGTTTGGGCTTTTTATTAGACGTAGGGCTAGAA
TATCTTAGTCTTAGTAGAAGTAGTAAAACCCTTTCTGGAGGCGAATCCCAAAGGATTCGTTTGGCAACTCAGATAGGTTC
GCAGTTGGTGAATGTCCTTTATATTTTAGACGAACCTTCTATTGGGCTTCACCAGAGAGATAACGAAAGACTTATCAACT
CTTTAAAAAGTTTACGAGATTTAGGAAACTCTGTTCTTGTGGTGGAACACGATAAGGATATGATTTTGGAAGCCGATGAA
GTGCTAGACATCGGACCTAAAGCAGGTAAATATGGCGGAAAAGTCTTGTGGCAAGGCAGCCCAAAAGATTTAATAAAAGC
TGATACCATTACAGCAGATTACCTCACAGGAAGAAGAAAAATAGAAATTCCCGAAAAGAGAAGAGAAGGCAATGGTAATG
AGATTGTCCTCAAAGGAGCTACGGGCAATAATCTTAAAAATGTAACTCTAAAAATTCCTTTAGGGAAGATGGTTGTAGTT
ACGGGGATTTCGGGAAGTGGAAAATCCTCGCTAATCAACGGAACTCTCTACCCTATTCTTAACCGACATTTCTACCGTGC
TGTGCAAGAGCCTCTACCTTACGAAAAGATAGAAGGTATAGAGCATATAGACAAAATAGTAGATGTAGACCAAACGCCCA
TCGGTAGAACGCCTCGTTCTAACCCTGCTACTTACACAGGTGTATTTTCGGATATCCGAACCTTGTTCGCTAACCTTCCA
GAAAGTAAAATCAGAGGTTATAAGGCAGGGAGGTTTTCGTTTAATGTTAAAGGTGGACGCTGCGAAACTTGTCAAGGAGG
TGGTTTGAAAGTGATTGAAATGAATTTCTTGCCTGATGTCTATGTACATTGCGAAACCTGCAACGGCAAACGCTTTAATA
GAGAGACCTTGGAGGTAAGATATAAAGGTAAATCTATATCCGATGTCCTAGATATGACTATAGACGAAGCTGTGGAATTT
TTTCAGCCAATCCCCAAAATCTATTCTAAGGTGAAAACGCTACAAGAAGTTGGTTTAGGTTATATTACCTTAGGACAACA
GTCTACTACACTTTCAGGCGGAGAGGCTCAAAGGGTAAAATTGGCTACAGAACTTTCTAAGAAACAAACAGGTAAAACAC
TTTATATCTTAGATGAACCTACCACAGGACTGCATTTTGAAGATGTTAAGATTCTGATGGAGGTTATCCAAAAGCTAGTA
GATTTGGGTAACTCTTTTATCATTATTGAACATAATATGGACGTGATAAAACTTGCCGACCATATTATAGATGTAGGTCC
AGAAGGTGGTAAAAATGGAGGAAGCATTGTGGCAGAAGGTACTCCAGAAGAAATTATAAAGAATAAAAAATCTATCACAG
GTAAATTTTTGAAAAAAGAAATGTAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-391)

• UvrA interaction domain (UvrA_inter) (135-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	51.589	100	0.518
uvrA	Streptococcus pneumoniae TIGR4	51.589	100	0.518
uvrA	Streptococcus pneumoniae D39	51.589	100	0.518