Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   ACD268_RS08145 Genome accession   NZ_CP168299
Coordinates   1598081..1598347 (-) Length   88 a.a.
NCBI ID   WP_001818764.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain FC1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1593081..1603347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACD268_RS08135 (ACD268_08135) metF 1594641..1595507 (-) 867 WP_000089976.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  ACD268_RS08140 (ACD268_08140) metE 1595571..1597820 (-) 2250 WP_000108199.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACD268_RS08145 (ACD268_08145) HI0659 1598081..1598347 (-) 267 WP_001818764.1 helix-turn-helix domain-containing protein Machinery gene
  ACD268_RS08150 (ACD268_08150) - 1598431..1598919 (-) 489 Protein_1613 transposase -
  ACD268_RS08155 (ACD268_08155) - 1599075..1600076 (+) 1002 WP_330789309.1 endonuclease/exonuclease/phosphatase family protein -
  ACD268_RS08160 (ACD268_08160) pheT 1600249..1602654 (-) 2406 WP_050308865.1 phenylalanine--tRNA ligase subunit beta -
  ACD268_RS08165 (ACD268_08165) - 1602731..1603240 (-) 510 WP_000619941.1 N-acetyltransferase -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9627.08 Da        Isoelectric Point: 4.2720

>NTDB_id=935446 ACD268_RS08145 WP_001818764.1 1598081..1598347(-) (HI0659) [Streptococcus pneumoniae strain FC1]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGVSQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=935446 ACD268_RS08145 WP_001818764.1 1598081..1598347(-) (HI0659) [Streptococcus pneumoniae strain FC1]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAGTGAGTCAACCTGTCATAGCTA
GGATGGAAACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

57.143

87.5

0.5