Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ACD268_RS02070 Genome accession   NZ_CP168299
Coordinates   385797..386507 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain FC1     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 380797..391507
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACD268_RS02050 (ACD268_02050) amiD 381301..382227 (+) 927 WP_000103697.1 oligopeptide ABC transporter permease OppC Regulator
  ACD268_RS02055 (ACD268_02055) amiE 382236..383303 (+) 1068 WP_000159554.1 ABC transporter ATP-binding protein Regulator
  ACD268_RS02060 (ACD268_02060) - 383314..384240 (+) 927 WP_001291293.1 ATP-binding cassette domain-containing protein -
  ACD268_RS02065 (ACD268_02065) - 384315..385641 (-) 1327 Protein_405 ISL3 family transposase -
  ACD268_RS02070 (ACD268_02070) treR 385797..386507 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  ACD268_RS02075 (ACD268_02075) treP 386692..388659 (+) 1968 WP_050243901.1 PTS system trehalose-specific EIIBC component -
  ACD268_RS02080 (ACD268_02080) treC 388837..390462 (+) 1626 WP_000171223.1 alpha,alpha-phosphotrehalase -
  ACD268_RS02085 (ACD268_02085) - 390604..390852 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=935398 ACD268_RS02070 WP_000760673.1 385797..386507(-) (treR) [Streptococcus pneumoniae strain FC1]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=935398 ACD268_RS02070 WP_000760673.1 385797..386507(-) (treR) [Streptococcus pneumoniae strain FC1]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAGAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593