Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   V5G23_RS22360 Genome accession   NZ_CP144925
Coordinates   4274568..4275158 (-) Length   196 a.a.
NCBI ID   WP_003181328.1    Uniprot ID   A0A1Y0YEF8
Organism   Bacillus licheniformis strain CP13     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4269568..4280158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G23_RS22335 (V5G23_22335) mobB 4269801..4270328 (-) 528 WP_073425595.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  V5G23_RS22340 (V5G23_22340) glp 4270295..4271587 (-) 1293 WP_003181335.1 gephyrin-like molybdotransferase Glp -
  V5G23_RS22345 (V5G23_22345) - 4271607..4272620 (-) 1014 WP_025805761.1 molybdopterin-synthase adenylyltransferase MoeB -
  V5G23_RS22350 (V5G23_22350) - 4272726..4273313 (-) 588 WP_016886580.1 molybdenum cofactor guanylyltransferase -
  V5G23_RS22355 (V5G23_22355) - 4273466..4274422 (+) 957 WP_003181329.1 hypothetical protein -
  V5G23_RS22360 (V5G23_22360) rok 4274568..4275158 (-) 591 WP_003181328.1 transcriptional regulator Rok Regulator
  V5G23_RS22365 (V5G23_22365) - 4275706..4276164 (-) 459 WP_003181327.1 redoxin domain-containing protein -
  V5G23_RS22370 (V5G23_22370) ahpA 4276246..4276788 (-) 543 WP_003181325.1 biofilm-specific peroxidase AhpA -
  V5G23_RS22375 (V5G23_22375) - 4277083..4277328 (-) 246 WP_003181323.1 YkuS family protein -
  V5G23_RS22380 (V5G23_22380) - 4277391..4278515 (-) 1125 WP_003181321.1 N-acetyldiaminopimelate deacetylase -
  V5G23_RS22385 (V5G23_22385) dapD 4278584..4279294 (-) 711 WP_003181319.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  V5G23_RS22390 (V5G23_22390) - 4279400..4279855 (-) 456 WP_003181317.1 flavodoxin -

Sequence

Protein


Download         Length: 196 a.a.        Molecular weight: 22665.62 Da        Isoelectric Point: 9.9960

>NTDB_id=935390 V5G23_RS22360 WP_003181328.1 4274568..4275158(-) (rok) [Bacillus licheniformis strain CP13]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPN
MTTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 591 bp        

>NTDB_id=935390 V5G23_RS22360 WP_003181328.1 4274568..4275158(-) (rok) [Bacillus licheniformis strain CP13]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTAGAGCAGCTGAACGAGGCTGAAGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAACATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACTGAATCTCTCCCTGTTTTAGCTGAATTGGCTGCACAGGAGATGAAGAGCTACCAGCAACAGCAG
CAACAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGA
TGGAACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAATTGCGTGAAGCGGCGATTAAAACAT
TAAAACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAAT
ATGACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGG
TGAGATTTCTACTGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YEF8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.77

97.449

0.816