Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   V5G23_RS01275 Genome accession   NZ_CP144925
Coordinates   234463..234633 (-) Length   56 a.a.
NCBI ID   WP_031314537.1    Uniprot ID   -
Organism   Bacillus licheniformis strain CP13     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 229463..239633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G23_RS01250 (V5G23_01250) - 229761..230735 (-) 975 WP_075218387.1 ABC transporter ATP-binding protein -
  V5G23_RS01255 (V5G23_01255) - 230928..231716 (-) 789 WP_009328844.1 DUF2268 domain-containing protein -
  V5G23_RS01260 (V5G23_01260) fabF 231804..233042 (-) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  V5G23_RS01265 (V5G23_01265) - 233064..234002 (-) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  V5G23_RS01270 (V5G23_01270) - 234172..234411 (+) 240 WP_069500393.1 hypothetical protein -
  V5G23_RS01275 (V5G23_01275) comZ 234463..234633 (-) 171 WP_031314537.1 ComZ family protein Regulator
  V5G23_RS01280 (V5G23_01280) med 234659..235612 (-) 954 WP_009328848.1 BMP family ABC transporter substrate-binding protein Regulator
  V5G23_RS01285 (V5G23_01285) - 235699..236274 (-) 576 WP_009328849.1 hypothetical protein -
  V5G23_RS01290 (V5G23_01290) - 236361..237095 (-) 735 WP_009328850.1 hypothetical protein -
  V5G23_RS01295 (V5G23_01295) - 237327..237521 (+) 195 WP_009328851.1 YjzD family protein -
  V5G23_RS01300 (V5G23_01300) - 237592..237771 (-) 180 WP_003180573.1 YjzC family protein -
  V5G23_RS01305 (V5G23_01305) - 237953..238765 (+) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6274.27 Da        Isoelectric Point: 3.9646

>NTDB_id=935325 V5G23_RS01275 WP_031314537.1 234463..234633(-) (comZ) [Bacillus licheniformis strain CP13]
MEFLQIAMKYVPEAKEEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=935325 V5G23_RS01275 WP_031314537.1 234463..234633(-) (comZ) [Bacillus licheniformis strain CP13]
ATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGAAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACCTGTTTACAAAAGTGATGGCGGAAGCTTACGAGCTCGGTAAAGCGGACGCCGGTT
CTGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75