Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   V5G20_RS25970 Genome accession   NZ_CP144922
Coordinates   5411515..5412468 (-) Length   317 a.a.
NCBI ID   WP_003392809.1    Uniprot ID   M8D1G8
Organism   Brevibacillus borstelensis strain CP19     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5406515..5417468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G20_RS25945 (V5G20_25945) - 5407518..5407838 (+) 321 WP_024984293.1 hypothetical protein -
  V5G20_RS25950 (V5G20_25950) - 5408005..5408523 (-) 519 WP_338462763.1 hypothetical protein -
  V5G20_RS25955 (V5G20_25955) - 5408687..5409682 (-) 996 WP_024984291.1 siderophore ABC transporter substrate-binding protein -
  V5G20_RS25960 (V5G20_25960) - 5409823..5410581 (-) 759 WP_003392803.1 ABC transporter ATP-binding protein -
  V5G20_RS25965 (V5G20_25965) - 5410575..5411525 (-) 951 WP_338462766.1 iron chelate uptake ABC transporter family permease subunit -
  V5G20_RS25970 (V5G20_25970) ceuB 5411515..5412468 (-) 954 WP_003392809.1 ABC transporter permease Machinery gene
  V5G20_RS25975 (V5G20_25975) - 5412711..5413259 (-) 549 WP_003392811.1 NADPH-dependent FMN reductase -
  V5G20_RS25980 (V5G20_25980) - 5413488..5413877 (-) 390 WP_122958029.1 MFS transporter -
  V5G20_RS25985 (V5G20_25985) - 5414343..5414630 (-) 288 WP_003392817.1 HesB/YadR/YfhF family protein -
  V5G20_RS25990 (V5G20_25990) - 5414905..5415849 (-) 945 WP_338462770.1 DMT family transporter -
  V5G20_RS25995 (V5G20_25995) - 5415984..5417363 (+) 1380 WP_338462772.1 PLP-dependent aminotransferase family protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35049.30 Da        Isoelectric Point: 9.8221

>NTDB_id=935317 V5G20_RS25970 WP_003392809.1 5411515..5412468(-) (ceuB) [Brevibacillus borstelensis strain CP19]
MKIGYLFLALLLFSFGSVFIGVKDISPLDVFQLTDDQVEILLVSRLPRLISIIIAGVSMSICGLIMQQLSRNKFVSPTTA
GTLDSARLGILVSLMLFTTASPLVKMLISFVFALLGTFVFMRILEKIKYKDTIFIPLVGLMFGNIISSFATFIAYKYDLI
QNMSAWLQGDFSMIMKGRYELMYISIPLLVIAYLYANKFTIAGMGEDFSKNLGLNYRRVVNIGLVIVALVTASVVLTVGM
IPFLGLIIPNIVSIYRGDNLKNSLSHTALLGAVFVLFCDILGRVIIYPYEISISLTVGVLGSGIFAYLLMRRKAYGI

Nucleotide


Download         Length: 954 bp        

>NTDB_id=935317 V5G20_RS25970 WP_003392809.1 5411515..5412468(-) (ceuB) [Brevibacillus borstelensis strain CP19]
ATGAAAATCGGATATTTGTTTCTTGCACTGCTTCTATTCTCATTCGGGTCTGTCTTTATCGGTGTAAAGGACATTTCCCC
GCTGGATGTATTCCAGCTGACAGACGACCAGGTCGAAATACTGCTCGTGAGCAGGCTTCCCCGTCTGATCAGCATTATTA
TTGCAGGCGTCAGCATGAGTATTTGCGGTCTGATCATGCAGCAGCTAAGCCGGAATAAATTTGTTTCTCCCACGACAGCA
GGGACGCTAGATTCCGCCAGATTGGGGATTCTCGTATCGCTGATGCTGTTTACCACGGCAAGTCCGTTGGTCAAGATGCT
GATTTCTTTCGTCTTTGCCTTGCTGGGCACTTTTGTGTTCATGAGAATCCTGGAGAAGATCAAGTACAAGGATACGATCT
TCATCCCGCTCGTCGGACTGATGTTCGGGAACATCATCAGCTCCTTCGCTACCTTTATCGCGTATAAGTACGACCTGATC
CAGAACATGTCGGCATGGCTGCAGGGCGATTTTTCCATGATCATGAAAGGGCGCTACGAGCTGATGTACATCAGCATTCC
GCTGCTTGTTATCGCATACCTGTACGCCAACAAATTTACGATAGCCGGGATGGGCGAGGACTTTTCCAAGAATTTGGGCC
TGAATTACAGGCGGGTGGTCAACATTGGATTGGTGATTGTTGCCCTGGTCACCGCGTCCGTCGTGTTGACTGTGGGGATG
ATTCCGTTTCTGGGCCTGATCATCCCGAACATCGTTTCGATCTATCGTGGCGACAACCTGAAAAACAGCCTTTCTCATAC
CGCTTTATTGGGAGCCGTATTCGTACTCTTCTGCGACATCCTTGGCCGGGTCATCATCTACCCATACGAAATTTCCATCA
GCCTGACCGTCGGGGTGCTCGGAAGTGGTATCTTTGCTTATTTACTGATGAGGAGAAAGGCATATGGCATATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M8D1G8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

55.949

98.107

0.549