Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ACD269_RS08915 Genome accession   NZ_CP168260
Coordinates   1745316..1746026 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain FC2     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1740316..1751026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACD269_RS08900 (ACD269_08900) - 1740857..1741105 (-) 249 WP_000364990.1 YneF family protein -
  ACD269_RS08905 (ACD269_08905) treC 1741361..1742986 (-) 1626 WP_000171226.1 alpha,alpha-phosphotrehalase -
  ACD269_RS08910 (ACD269_08910) treP 1743164..1745131 (-) 1968 WP_000514329.1 PTS system trehalose-specific EIIBC component -
  ACD269_RS08915 (ACD269_08915) treR 1745316..1746026 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  ACD269_RS08920 (ACD269_08920) - 1746182..1747517 (+) 1336 Protein_1766 ISL3 family transposase -
  ACD269_RS08925 (ACD269_08925) - 1747616..1748922 (+) 1307 Protein_1767 transposase -
  ACD269_RS08930 (ACD269_08930) - 1749056..1749982 (-) 927 WP_001291293.1 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=935252 ACD269_RS08915 WP_000760673.1 1745316..1746026(+) (treR) [Streptococcus pneumoniae strain FC2]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=935252 ACD269_RS08915 WP_000760673.1 1745316..1746026(+) (treR) [Streptococcus pneumoniae strain FC2]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593