Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | V5G21_RS02990 | Genome accession | NZ_CP144921 |
| Coordinates | 555388..556341 (-) | Length | 317 a.a. |
| NCBI ID | WP_011247737.1 | Uniprot ID | Q5WDY1 |
| Organism | Shouchella rhizosphaerae strain CP20 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 550388..561341
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V5G21_RS02960 (V5G21_02960) | - | 550453..551076 (+) | 624 | WP_011247731.1 | deoxynucleoside kinase | - |
| V5G21_RS02965 (V5G21_02965) | - | 551088..551717 (+) | 630 | WP_011247732.1 | deoxynucleoside kinase | - |
| V5G21_RS02970 (V5G21_02970) | - | 551756..552364 (-) | 609 | WP_011247733.1 | restriction endonuclease | - |
| V5G21_RS02975 (V5G21_02975) | - | 552539..553510 (-) | 972 | WP_011247734.1 | siderophore ABC transporter substrate-binding protein | - |
| V5G21_RS02980 (V5G21_02980) | - | 553627..554448 (-) | 822 | WP_208610215.1 | ATP-binding cassette domain-containing protein | - |
| V5G21_RS02985 (V5G21_02985) | - | 554445..555398 (-) | 954 | WP_051881152.1 | iron chelate uptake ABC transporter family permease subunit | - |
| V5G21_RS02990 (V5G21_02990) | ceuB | 555388..556341 (-) | 954 | WP_011247737.1 | ABC transporter permease | Machinery gene |
| V5G21_RS02995 (V5G21_02995) | - | 556491..557117 (-) | 627 | WP_035202684.1 | phosphatase PAP2 family protein | - |
| V5G21_RS03000 (V5G21_03000) | - | 557360..558757 (+) | 1398 | WP_035202683.1 | L-cystine transporter | - |
| V5G21_RS03005 (V5G21_03005) | - | 558802..559275 (-) | 474 | WP_011247740.1 | small multi-drug export protein | - |
| V5G21_RS03010 (V5G21_03010) | - | 559364..559822 (+) | 459 | WP_011247741.1 | DinB family protein | - |
| V5G21_RS03015 (V5G21_03015) | - | 559851..560231 (-) | 381 | WP_011247742.1 | YisL family protein | - |
| V5G21_RS03020 (V5G21_03020) | - | 560306..560803 (-) | 498 | WP_035202680.1 | cytochrome c biogenesis protein CcdC | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35003.22 Da Isoelectric Point: 10.1201
>NTDB_id=935245 V5G21_RS02990 WP_011247737.1 555388..556341(-) (ceuB) [Shouchella rhizosphaerae strain CP20]
MKIKYLLPLLLILSFASLFIGVQDISPLDLFRLDDEDVQTLVISRIPRLLSVLIVGVSLSVCGLIMQQLTQNKFVSPTTA
GTMDWARLGILVAVVVFTQATTLQRMFIAFLFALFGTFLFMKILERIRFKNVVFVPLVGLMLGSVVNSITTFLAYRYDLV
QSLSSWMQGSFSLVLKGRYEILYIGIPLVVIAFLFANRFTVAGMGKDFSTNLGLNYNQIMNIGLFIVAMITATIVVTIGS
IPFLGLVIPNIVSIIRGDNLKNSLPHTALLGAIFLLACDILGRVLIYPYEIPIGLVVGVVGSAIFLYLLLRRRSHAA
MKIKYLLPLLLILSFASLFIGVQDISPLDLFRLDDEDVQTLVISRIPRLLSVLIVGVSLSVCGLIMQQLTQNKFVSPTTA
GTMDWARLGILVAVVVFTQATTLQRMFIAFLFALFGTFLFMKILERIRFKNVVFVPLVGLMLGSVVNSITTFLAYRYDLV
QSLSSWMQGSFSLVLKGRYEILYIGIPLVVIAFLFANRFTVAGMGKDFSTNLGLNYNQIMNIGLFIVAMITATIVVTIGS
IPFLGLVIPNIVSIIRGDNLKNSLPHTALLGAIFLLACDILGRVLIYPYEIPIGLVVGVVGSAIFLYLLLRRRSHAA
Nucleotide
Download Length: 954 bp
>NTDB_id=935245 V5G21_RS02990 WP_011247737.1 555388..556341(-) (ceuB) [Shouchella rhizosphaerae strain CP20]
ATGAAAATAAAATATTTACTCCCTTTGCTTTTAATTTTATCGTTTGCATCTTTATTTATTGGCGTACAGGATATATCGCC
ACTTGACTTATTTCGTTTAGACGATGAAGATGTGCAAACACTTGTCATTAGCCGTATCCCCCGTCTATTGAGTGTATTGA
TTGTTGGTGTTAGTTTAAGCGTTTGCGGTTTAATTATGCAGCAGCTTACACAAAACAAATTTGTTTCGCCGACAACAGCT
GGAACTATGGATTGGGCTCGGCTTGGCATTCTTGTCGCCGTGGTTGTTTTTACACAAGCGACCACGTTGCAAAGGATGTT
TATTGCCTTTCTTTTTGCGTTGTTTGGAACGTTTCTTTTTATGAAAATACTGGAGCGCATCCGCTTTAAAAACGTTGTGT
TTGTCCCGCTTGTCGGGCTTATGTTAGGCAGTGTGGTCAACTCAATCACGACTTTTCTAGCTTACCGGTATGATTTAGTG
CAAAGCTTATCTTCTTGGATGCAAGGGAGCTTTTCACTCGTTCTTAAAGGGCGCTATGAAATTTTATACATAGGCATTCC
CCTTGTTGTCATTGCCTTTTTATTCGCAAATCGCTTTACGGTAGCAGGAATGGGGAAGGATTTTTCGACAAACTTGGGCT
TAAATTATAACCAAATTATGAATATCGGCCTTTTCATTGTCGCGATGATCACGGCTACGATTGTCGTCACAATTGGCTCA
ATTCCTTTTTTAGGGCTAGTCATTCCTAACATCGTTTCGATTATAAGAGGGGACAACTTAAAAAACAGTTTGCCTCATAC
AGCGCTATTAGGCGCCATTTTCTTGCTCGCTTGTGATATTTTAGGGCGTGTTCTCATTTATCCATATGAAATTCCGATTG
GACTGGTCGTTGGGGTTGTCGGGAGCGCGATCTTTTTGTACTTGCTCTTAAGGAGACGATCTCATGCAGCCTAA
ATGAAAATAAAATATTTACTCCCTTTGCTTTTAATTTTATCGTTTGCATCTTTATTTATTGGCGTACAGGATATATCGCC
ACTTGACTTATTTCGTTTAGACGATGAAGATGTGCAAACACTTGTCATTAGCCGTATCCCCCGTCTATTGAGTGTATTGA
TTGTTGGTGTTAGTTTAAGCGTTTGCGGTTTAATTATGCAGCAGCTTACACAAAACAAATTTGTTTCGCCGACAACAGCT
GGAACTATGGATTGGGCTCGGCTTGGCATTCTTGTCGCCGTGGTTGTTTTTACACAAGCGACCACGTTGCAAAGGATGTT
TATTGCCTTTCTTTTTGCGTTGTTTGGAACGTTTCTTTTTATGAAAATACTGGAGCGCATCCGCTTTAAAAACGTTGTGT
TTGTCCCGCTTGTCGGGCTTATGTTAGGCAGTGTGGTCAACTCAATCACGACTTTTCTAGCTTACCGGTATGATTTAGTG
CAAAGCTTATCTTCTTGGATGCAAGGGAGCTTTTCACTCGTTCTTAAAGGGCGCTATGAAATTTTATACATAGGCATTCC
CCTTGTTGTCATTGCCTTTTTATTCGCAAATCGCTTTACGGTAGCAGGAATGGGGAAGGATTTTTCGACAAACTTGGGCT
TAAATTATAACCAAATTATGAATATCGGCCTTTTCATTGTCGCGATGATCACGGCTACGATTGTCGTCACAATTGGCTCA
ATTCCTTTTTTAGGGCTAGTCATTCCTAACATCGTTTCGATTATAAGAGGGGACAACTTAAAAAACAGTTTGCCTCATAC
AGCGCTATTAGGCGCCATTTTCTTGCTCGCTTGTGATATTTTAGGGCGTGTTCTCATTTATCCATATGAAATTCCGATTG
GACTGGTCGTTGGGGTTGTCGGGAGCGCGATCTTTTTGTACTTGCTCTTAAGGAGACGATCTCATGCAGCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
49.367 |
99.685 |
0.492 |