Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   ACD269_RS02775 Genome accession   NZ_CP168260
Coordinates   533310..533576 (+) Length   88 a.a.
NCBI ID   WP_001844589.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain FC2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 528310..538576
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACD269_RS02755 (ACD269_02755) - 528523..529032 (+) 510 WP_000619950.1 N-acetyltransferase -
  ACD269_RS02760 (ACD269_02760) pheT 529109..531514 (+) 2406 WP_000961553.1 phenylalanine--tRNA ligase subunit beta -
  ACD269_RS02765 (ACD269_02765) - 531582..532583 (-) 1002 WP_000597997.1 endonuclease/exonuclease/phosphatase family protein -
  ACD269_RS02770 (ACD269_02770) - 532739..533184 (+) 446 Protein_545 transposase -
  ACD269_RS02775 (ACD269_02775) HI0659 533310..533576 (+) 267 WP_001844589.1 helix-turn-helix domain-containing protein Machinery gene
  ACD269_RS02780 (ACD269_02780) metE 533836..536085 (+) 2250 WP_000108204.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACD269_RS02785 (ACD269_02785) metF 536149..537015 (+) 867 WP_050210609.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9629.24 Da        Isoelectric Point: 5.1633

>NTDB_id=935202 ACD269_RS02775 WP_001844589.1 533310..533576(+) (HI0659) [Streptococcus pneumoniae strain FC2]
MEGCPSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVLASLGKILAV
VRLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=935202 ACD269_RS02775 WP_001844589.1 533310..533576(+) (HI0659) [Streptococcus pneumoniae strain FC2]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAACTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGATACTAGCAGTC
GTCCGACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-75)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.74

87.5

0.523