Detailed information NTG0935197

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V5G22_RS10400
• Genome accession: NZ_CP144920
• Coordinates: 2089145..2090302 (+)
• Length: 385 a.a.
• NCBI ID: WP_003185733.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain CP26
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2084145..2095302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5G22_RS10375 (V5G22_10375)	-	2084247..2085428 (+)	1182	WP_011198354.1	glycosyltransferase family 1 protein	-
V5G22_RS10380 (V5G22_10380)	-	2085559..2086623 (+)	1065	WP_003185739.1	MraY family glycosyltransferase	-
V5G22_RS10385 (V5G22_10385)	-	2086743..2087117 (+)	375	WP_003185738.1	hypothetical protein	-
V5G22_RS10390 (V5G22_10390)	-	2087202..2088278 (-)	1077	WP_003185737.1	LCP family protein	-
V5G22_RS10395 (V5G22_10395)	-	2088293..2088931 (-)	639	WP_011198353.1	YigZ family protein	-
V5G22_RS10400 (V5G22_10400)	degS	2089145..2090302 (+)	1158	WP_003185733.1	histidine kinase	Regulator
V5G22_RS10405 (V5G22_10405)	degU	2090384..2091073 (+)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
V5G22_RS10410 (V5G22_10410)	-	2091193..2092035 (+)	843	WP_003185726.1	DegV family protein	-
V5G22_RS10415 (V5G22_10415)	comFA	2092156..2093550 (+)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
V5G22_RS10420 (V5G22_10420)	-	2093605..2093889 (+)	285	WP_003185718.1	competence protein ComFB	-
V5G22_RS10425 (V5G22_10425)	comFC	2093846..2094580 (+)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
V5G22_RS10430 (V5G22_10430)	-	2094639..2095058 (+)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44636.36 Da
• Isoelectric Point: 6.7863

>NTDB_id=935197 V5G22_RS10400 WP_003185733.1 2089145..2090302(+) (degS) [Bacillus licheniformis strain CP26]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=935197 V5G22_RS10400 WP_003185733.1 2089145..2090302(+) (degS) [Bacillus licheniformis strain CP26]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATTCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894