Detailed information NTG0934987

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACD599_RS21835
• Genome accession: NZ_CP168214
• Coordinates: 4520029..4521054 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC23-1020
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4515029..4526054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACD599_RS21825 (ACD599_21820)	rpmE	4517260..4517472 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACD599_RS21830 (ACD599_21825)	priA	4517675..4519873 (+)	2199	WP_042099082.1	primosomal protein N'	Machinery gene
ACD599_RS21835 (ACD599_21830)	cytR	4520029..4521054 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACD599_RS21840 (ACD599_21835)	ftsN	4521146..4522105 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACD599_RS21845 (ACD599_21840)	hslV	4522198..4522728 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACD599_RS21850 (ACD599_21845)	hslU	4522738..4524069 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ACD599_RS21855 (ACD599_21850)	menA	4524136..4525062 (+)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACD599_RS21860 (ACD599_21855)	rraA	4525155..4525640 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACD599_RS21865 (ACD599_21860)	zapB	4525725..4525970 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=934987 ACD599_RS21835 WP_000644904.1 4520029..4521054(+) (cytR) [Escherichia coli strain EC23-1020]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=934987 ACD599_RS21835 WP_000644904.1 4520029..4521054(+) (cytR) [Escherichia coli strain EC23-1020]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628