Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8617_RS03100 | Genome accession | NZ_AP028362 |
| Coordinates | 596624..597007 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10611 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 591624..602007
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8617_RS03080 (B10611_06040) | - | 591703..593637 (-) | 1935 | WP_002867720.1 | RNB domain-containing ribonuclease | - |
| R8617_RS03085 (B10611_06050) | ilvC | 593756..594778 (+) | 1023 | WP_002852218.1 | ketol-acid reductoisomerase | - |
| R8617_RS03090 (B10611_06060) | - | 594782..595864 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| R8617_RS03095 (B10611_06070) | dprA | 595854..596627 (+) | 774 | WP_002867721.1 | DNA-processing protein DprA | Machinery gene |
| R8617_RS03100 (B10611_06080) | dprB | 596624..597007 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8617_RS03105 (B10611_06090) | - | 597036..597875 (+) | 840 | WP_011049748.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8617_RS03110 (B10611_06100) | msrA | 598051..598548 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8617_RS03115 (B10611_06110) | ppa | 598590..599108 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8617_RS03120 (B10611_06120) | adk | 599118..599696 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8617_RS03125 (B10611_06130) | aspS | 599693..601444 (-) | 1752 | WP_146263284.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=93487 R8617_RS03100 WP_002852281.1 596624..597007(+) (dprB) [Campylobacter jejuni strain BCH-10611]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=93487 R8617_RS03100 WP_002852281.1 596624..597007(+) (dprB) [Campylobacter jejuni strain BCH-10611]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |