Detailed information NTG0934682

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: V4941_RS07280
• Genome accession: NZ_CP144736
• Coordinates: 1674988..1677198 (-)
• Length: 736 a.a.
• NCBI ID: WP_156483617.1
• Uniprot ID: -
• Organism: Azotobacter vinelandii DJ
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1669988..1682198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V4941_RS07245 (V4941_07240)	murB	1670371..1671390 (-)	1020	WP_012700115.1	UDP-N-acetylmuramate dehydrogenase	-
V4941_RS07250 (V4941_07245)	-	1671387..1671851 (-)	465	WP_012700114.1	low molecular weight protein-tyrosine-phosphatase	-
V4941_RS07255 (V4941_07250)	kdsB	1671851..1672615 (-)	765	WP_012700113.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
V4941_RS07260 (V4941_07255)	-	1672612..1672797 (-)	186	WP_012700112.1	Trm112 family protein	-
V4941_RS07265 (V4941_07260)	lpxK	1672858..1673859 (-)	1002	WP_012700111.1	tetraacyldisaccharide 4'-kinase	-
V4941_RS07270 (V4941_07265)	-	1673859..1674287 (-)	429	WP_012700110.1	biopolymer transporter ExbD	-
V4941_RS07275 (V4941_07270)	-	1674284..1674916 (-)	633	WP_041807047.1	MotA/TolQ/ExbB proton channel family protein	-
V4941_RS07280 (V4941_07275)	comA	1674988..1677198 (-)	2211	WP_156483617.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
V4941_RS07285 (V4941_07280)	-	1677334..1677861 (+)	528	WP_012700107.1	DUF2062 domain-containing protein	-
V4941_RS07290 (V4941_07285)	-	1677886..1679130 (-)	1245	WP_012700106.1	lipoprotein-releasing ABC transporter permease subunit	-
V4941_RS07295 (V4941_07290)	lolD	1679133..1679831 (-)	699	WP_012700105.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
V4941_RS07300 (V4941_07295)	-	1679824..1681074 (-)	1251	WP_012700104.1	lipoprotein-releasing ABC transporter permease subunit	-
V4941_RS07305 (V4941_07300)	-	1681322..1682044 (+)	723	WP_012700103.1	glycerophosphodiester phosphodiesterase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 79919.77 Da
• Isoelectric Point: 10.2397

>NTDB_id=934682 V4941_RS07280 WP_156483617.1 1674988..1677198(-) (comA) [Azotobacter vinelandii DJ]
MLALTAGLLVLRFLPALPPWWLWSPMALGAAILLAARRYSPALFLFGLGWACLSAHWALEERLPVELDGRTLWLEGLVVG
LPARIDGTLHFQLEEASSRRAELPGRLRLAWHAGPEVRAGERWRLAVSLKRPRGLVNPQGFDYEAWLLAQRIGATGTVKA
GERLGTPENADGWRDSLRQRLLQVDAHGREGALAALVMGDASGLSVADWKLLQDTGTVHLMVISGQHVGLLAGLVYGLVV
LLARFGLWPGFLPWLPCACGLAFATALGYGWLAGFGVPVQRACAMLAVVLFWRLRFRHLGLWLPILLALDGVLLLEPLAS
LQPGFWLSFGAVVILVLAFGGRLGAWSWRQTLWRAQWTSALGLLPLLLALGLPISLSGPLANLVAVPWVGFAVVPLALLG
TLLLPLPAMGEGLLWLAGALLETLFRLLGEIAGAVPAWLPHAVPVWGWLLALLGTLLILLPAGVPLRVPGLALLLPLAFP
PQERIPQARADVWLLDVGQGLAVLVRTRGHDLLYDAGPRFGDFDLGERVVLPSLRNLGVGRLDRLLLSHADGDHAGGALA
VRRALPVGEVVAGEAQAQSAALAAQPCARRAWQWDGVRFATWHWTAVQEGNRASCVLLVEAAGERLLLTGDIDAAAERAL
LDSHPEWRADWLLAPHHGSRSSSSPALLKALAPRAVLISRGWNNGFGHPHAQVVERYRKLPAVIHDTARQGALRFRLGDW
GRARGLREEPRFWREK

Nucleotide

• Length: 2211 bp

>NTDB_id=934682 V4941_RS07280 WP_156483617.1 1674988..1677198(-) (comA) [Azotobacter vinelandii DJ]
ATGTTGGCGCTCACCGCAGGTCTGCTCGTCCTGCGTTTCCTTCCGGCCCTACCGCCCTGGTGGCTGTGGTCGCCGATGGC
GCTGGGCGCTGCGATCCTTCTGGCGGCGCGTCGCTATTCGCCGGCGCTCTTTCTCTTCGGTCTCGGCTGGGCCTGCCTGT
CGGCGCACTGGGCGCTGGAGGAACGGTTGCCTGTCGAACTCGATGGTCGCACCCTGTGGCTGGAGGGGCTGGTGGTCGGT
CTGCCGGCGCGCATCGACGGCACGCTGCATTTCCAACTGGAGGAGGCCTCTTCCCGGCGCGCCGAACTGCCCGGGCGACT
GCGCCTAGCGTGGCACGCCGGGCCGGAGGTCCGCGCCGGGGAGCGCTGGCGCCTGGCGGTCAGCCTCAAGCGTCCGCGCG
GCCTGGTCAACCCGCAGGGTTTCGATTACGAGGCCTGGCTGCTGGCCCAGCGGATCGGCGCCACCGGGACGGTGAAAGCG
GGAGAGCGACTCGGAACGCCGGAAAACGCCGACGGTTGGCGCGATTCCCTGCGCCAGCGCCTGCTGCAGGTCGATGCCCA
TGGCCGTGAGGGCGCGCTCGCCGCGCTGGTGATGGGCGACGCGTCCGGGCTGAGCGTGGCGGACTGGAAGCTCCTGCAGG
ATACCGGCACCGTGCATCTGATGGTGATCTCCGGCCAGCATGTCGGCCTGCTTGCCGGCCTGGTCTACGGGCTGGTGGTC
CTGCTGGCGAGATTTGGCCTGTGGCCGGGTTTTCTGCCCTGGTTGCCCTGTGCCTGCGGCCTGGCCTTCGCCACCGCGCT
CGGTTATGGCTGGCTGGCCGGCTTCGGGGTACCAGTACAGCGGGCCTGCGCCATGCTCGCCGTGGTGCTGTTCTGGCGCC
TGCGTTTCCGCCACCTGGGTCTCTGGCTACCCATCCTGCTGGCGCTGGACGGCGTACTGCTGCTCGAGCCCCTGGCCAGC
CTGCAGCCGGGGTTCTGGCTGTCGTTCGGTGCGGTGGTGATCCTCGTCCTGGCCTTCGGCGGCCGGCTGGGTGCCTGGTC
GTGGCGGCAGACCCTGTGGCGAGCGCAGTGGACCAGTGCGCTGGGACTGCTACCGTTGTTGCTGGCCTTGGGCCTGCCGA
TCAGTCTCAGCGGTCCGTTGGCCAATCTGGTCGCGGTACCCTGGGTCGGTTTCGCGGTGGTCCCGCTGGCTCTGCTCGGA
ACCCTGCTGCTGCCCTTGCCGGCAATGGGCGAGGGCCTTCTCTGGCTGGCCGGCGCCTTGCTGGAGACGCTGTTTCGGCT
GCTCGGCGAGATCGCCGGCGCCGTACCGGCCTGGCTGCCCCACGCGGTGCCGGTCTGGGGCTGGCTGCTGGCGCTGCTCG
GGACCCTGCTGATCCTGCTGCCGGCGGGAGTGCCGCTGCGTGTCCCGGGACTGGCGCTGCTGCTGCCCCTGGCATTTCCG
CCGCAGGAGCGAATCCCGCAGGCACGGGCCGATGTCTGGCTGCTGGATGTCGGGCAGGGCCTTGCCGTGCTTGTGCGTAC
CCGCGGGCACGACCTGCTCTATGATGCTGGGCCGCGTTTCGGCGATTTCGATCTGGGCGAGCGCGTGGTCCTGCCTTCGC
TGCGCAATCTCGGCGTGGGCCGCCTGGATCGCCTGCTGCTCAGCCATGCCGATGGCGACCACGCCGGTGGCGCCCTGGCC
GTGCGGCGCGCTCTGCCGGTGGGCGAGGTCGTCGCCGGCGAGGCGCAGGCGCAATCGGCGGCGCTCGCCGCGCAGCCTTG
CGCCCGTCGCGCCTGGCAGTGGGATGGTGTGCGTTTCGCCACCTGGCACTGGACGGCCGTGCAAGAGGGCAATCGGGCTT
CCTGCGTGCTGCTGGTCGAGGCCGCCGGCGAGCGCCTGCTGCTGACCGGCGATATCGATGCCGCAGCCGAGCGGGCACTG
CTCGACAGCCACCCGGAGTGGCGCGCCGACTGGCTGCTGGCGCCTCACCACGGCAGCCGCAGTTCGTCTTCGCCGGCTCT
GCTCAAGGCCCTGGCGCCGCGCGCGGTGCTGATCTCGCGCGGCTGGAACAACGGCTTCGGCCATCCCCATGCGCAGGTCG
TGGAGCGTTACCGGAAGCTGCCGGCCGTGATTCACGATACTGCGCGCCAGGGGGCCCTGCGGTTTCGCCTGGGCGACTGG
GGCCGGGCGCGCGGGCTGCGCGAAGAGCCCCGCTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (196-461)

• Domain of unknown function (DUF4131) (DUF4131) (18-163)

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-678)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	65.912	96.06	0.633
comA	Ralstonia pseudosolanacearum GMI1000	34.814	100	0.394