Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   V4939_RS00645 Genome accession   NZ_CP144733
Coordinates   119716..120123 (+) Length   135 a.a.
NCBI ID   WP_012699006.1    Uniprot ID   M9YDI7
Organism   Azotobacter vinelandii DJ     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 114716..125123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V4939_RS00620 (V4939_00620) pyrR 115913..116416 (-) 504 WP_012699001.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  V4939_RS00625 (V4939_00625) ruvX 116460..116888 (-) 429 WP_012699002.1 Holliday junction resolvase RuvX -
  V4939_RS00630 (V4939_00630) - 116885..117457 (-) 573 WP_041806863.1 YqgE/AlgH family protein -
  V4939_RS00635 (V4939_00635) - 117545..118438 (-) 894 WP_012699004.1 energy transducer TonB -
  V4939_RS00640 (V4939_00640) gshB 118532..119488 (-) 957 WP_012699005.1 glutathione synthase -
  V4939_RS00645 (V4939_00645) pilG 119716..120123 (+) 408 WP_012699006.1 twitching motility response regulator PilG Regulator
  V4939_RS00650 (V4939_00650) - 120476..121195 (-) 720 WP_012699007.1 16S rRNA (uracil(1498)-N(3))-methyltransferase -
  V4939_RS00655 (V4939_00655) - 121338..121877 (+) 540 WP_012699008.1 DUF3087 domain-containing protein -
  V4939_RS00660 (V4939_00660) - 121950..123356 (-) 1407 WP_012699009.1 adenosylmethionine--8-amino-7-oxononanoate transaminase -
  V4939_RS00665 (V4939_00665) - 123516..125030 (+) 1515 WP_231876177.1 flavin monoamine oxidase family protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14855.27 Da        Isoelectric Point: 7.3231

>NTDB_id=934652 V4939_RS00645 WP_012699006.1 119716..120123(+) (pilG) [Azotobacter vinelandii DJ]
MEHHSDGLKVMVIDDSKMIRRTAETLLKRVGCEVITAVDGFDALAKIADGHPRIIFVDIAMPRLDGYQTCALIKNNSAFK
STPVIMLSSRDGLFDKAKGRIVGSEQYLTKPFGKEELLGAIRAHVPDFVPLEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=934652 V4939_RS00645 WP_012699006.1 119716..120123(+) (pilG) [Azotobacter vinelandii DJ]
ATGGAACATCATTCCGACGGTTTGAAGGTCATGGTGATCGACGACTCAAAGATGATTCGTCGCACTGCGGAAACCCTGCT
GAAGAGGGTGGGGTGCGAGGTCATCACCGCCGTGGACGGCTTCGATGCCCTGGCCAAGATCGCCGACGGTCATCCGCGGA
TCATCTTCGTCGACATCGCGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCCTGATCAAGAACAACAGCGCATTCAAG
TCCACGCCGGTGATCATGCTGTCCTCCAGGGACGGCCTGTTCGACAAGGCCAAGGGACGTATCGTCGGTTCCGAGCAGTA
TCTGACCAAGCCCTTCGGCAAGGAAGAACTGCTGGGCGCGATCAGGGCCCACGTGCCCGATTTCGTCCCGCTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M9YDI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

92.593

0.689