Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   ACCK16_RS06510 Genome accession   NZ_CP168089
Coordinates   1337770..1338393 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain CUBIST-23     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1332770..1343393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCK16_RS06490 (ACCK16_06490) rpmG 1334347..1334496 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  ACCK16_RS06495 (ACCK16_06495) rpsN 1334949..1335218 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  ACCK16_RS06500 (ACCK16_06500) guaC 1335375..1336352 (+) 978 WP_000688134.1 GMP reductase -
  ACCK16_RS06505 (ACCK16_06505) - 1336374..1337390 (+) 1017 WP_169428106.1 CAP domain-containing protein -
  ACCK16_RS06510 (ACCK16_06510) dinR/lexA 1337770..1338393 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  ACCK16_RS06515 (ACCK16_06515) sosA 1338536..1338769 (+) 234 WP_000499648.1 DNA damage-induced cell division inhibitor SosA -
  ACCK16_RS06520 (ACCK16_06520) - 1338905..1339144 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  ACCK16_RS06525 (ACCK16_06525) recP/tkt 1339265..1341253 (+) 1989 WP_000481440.1 transketolase Machinery gene
  ACCK16_RS06530 (ACCK16_06530) - 1341531..1341773 (+) 243 WP_000246909.1 YneF family protein -
  ACCK16_RS06535 (ACCK16_06535) - 1341760..1341858 (+) 99 WP_001789897.1 hypothetical protein -
  ACCK16_RS06540 (ACCK16_06540) - 1341952..1342419 (+) 468 WP_115390911.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=934344 ACCK16_RS06510 WP_001208755.1 1337770..1338393(-) (dinR/lexA) [Staphylococcus aureus strain CUBIST-23]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=934344 ACCK16_RS06510 WP_001208755.1 1337770..1338393(-) (dinR/lexA) [Staphylococcus aureus strain CUBIST-23]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGAGAAATTGGAGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGCGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAGGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657