Detailed information NTG0934325

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: V4Q78_RS18700
• Genome accession: NZ_CP144563
• Coordinates: 3828377..3829531 (+)
• Length: 384 a.a.
• NCBI ID: WP_000755285.1
• Uniprot ID: A0A0J1DES9
• Organism: Acinetobacter baumannii strain AB5075 isolate grey variant
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3823377..3834531

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V4Q78_RS18675 (V4Q78_18675)	-	3823528..3824742 (+)	1215	WP_001177948.1	oxygenase MpaB family protein	-
V4Q78_RS18680 (V4Q78_18680)	-	3824812..3825018 (-)	207	WP_000182542.1	hypothetical protein	-
V4Q78_RS18685 (V4Q78_18685)	-	3825072..3827186 (-)	2115	WP_001120674.1	TonB-dependent copper receptor	-
V4Q78_RS18690 (V4Q78_18690)	-	3827259..3827687 (-)	429	WP_000231981.1	DUF2946 family protein	-
V4Q78_RS18695 (V4Q78_18695)	def	3827724..3828254 (-)	531	WP_001196539.1	peptide deformylase	-
V4Q78_RS18700 (V4Q78_18700)	tsaP	3828377..3829531 (+)	1155	WP_000755285.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
V4Q78_RS18705 (V4Q78_18705)	dprA	3829552..3830682 (+)	1131	WP_001991425.1	DNA-processing protein DprA	Machinery gene
V4Q78_RS18710 (V4Q78_18710)	-	3830733..3831302 (+)	570	WP_000633612.1	Sua5/YciO/YrdC/YwlC family protein	-
V4Q78_RS18715 (V4Q78_18715)	-	3831694..3832614 (-)	921	WP_001994180.1	DMT family transporter	-
V4Q78_RS18720 (V4Q78_18720)	-	3832720..3833370 (-)	651	WP_012300783.1	TetR/AcrR family transcriptional regulator	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 42299.18 Da
• Isoelectric Point: 8.5790

>NTDB_id=934325 V4Q78_RS18700 WP_000755285.1 3828377..3829531(+) (tsaP) [Acinetobacter baumannii strain AB5075 isolate grey variant]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLENIKQWLE
NSTILPADSITNTPYVVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGVELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide

• Length: 1155 bp

>NTDB_id=934325 V4Q78_RS18700 WP_000755285.1 3828377..3829531(+) (tsaP) [Acinetobacter baumannii strain AB5075 isolate grey variant]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTGAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTAGGTATTATTCGCCGCTACACTGGGCAAACCACAAACC
TGCAACCTCAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCTGTTATTCCACTTGAAAATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATGTGGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACCATTTACGCACGAGGACAAGGCTTAATTAATGGGCAACGTTATGCCGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGGTTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTACCAACACTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTGATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains

Predicted by InterproScan.

• LysM domain (LysM) (57-102)

3D structure

• AlphaFold DB: A0A0J1DES9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	98.698	100	0.987