Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACCK16_RS02340 Genome accession   NZ_CP168089
Coordinates   497071..497874 (+) Length   267 a.a.
NCBI ID   WP_001134191.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CUBIST-23     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 492071..502874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCK16_RS02320 (ACCK16_02320) - 493617..494954 (+) 1338 WP_000812839.1 aminotransferase class V-fold PLP-dependent enzyme -
  ACCK16_RS02325 (ACCK16_02325) tmk 494956..495573 (+) 618 WP_001272125.1 dTMP kinase -
  ACCK16_RS02330 (ACCK16_02330) - 495601..495930 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  ACCK16_RS02335 (ACCK16_02335) - 496144..497070 (+) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  ACCK16_RS02340 (ACCK16_02340) yaaT 497071..497874 (+) 804 WP_001134191.1 stage 0 sporulation family protein Regulator
  ACCK16_RS02345 (ACCK16_02345) yabA 497891..498238 (+) 348 WP_000375687.1 DNA replication initiation control protein YabA -
  ACCK16_RS02350 (ACCK16_02350) - 498512..499237 (+) 726 WP_000910685.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACCK16_RS02355 (ACCK16_02355) - 499230..499478 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  ACCK16_RS02360 (ACCK16_02360) rsmI 499480..500319 (+) 840 WP_000279924.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACCK16_RS02365 (ACCK16_02365) metG 500604..502577 (+) 1974 WP_001051142.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30218.86 Da        Isoelectric Point: 4.5759

>NTDB_id=934309 ACCK16_RS02340 WP_001134191.1 497071..497874(+) (yaaT) [Staphylococcus aureus strain CUBIST-23]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=934309 ACCK16_RS02340 WP_001134191.1 497071..497874(+) (yaaT) [Staphylococcus aureus strain CUBIST-23]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCACTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCAGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGTGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCCGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTACTATGAGG
AAGTACGTGCACAATTACCTGATATCGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.738

98.502

0.618