Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACCK21_RS09980 Genome accession   NZ_CP168087
Coordinates   2017878..2018618 (-) Length   246 a.a.
NCBI ID   WP_000216878.1    Uniprot ID   A0A0H2XJD3
Organism   Staphylococcus aureus strain CUBIST-25     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2012878..2023618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCK21_RS09955 (ACCK21_09955) hemH 2013754..2014677 (-) 924 WP_000162881.1 ferrochelatase -
  ACCK21_RS09960 (ACCK21_09960) hemE 2014735..2015772 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  ACCK21_RS09965 (ACCK21_09965) - 2015762..2015872 (-) 111 WP_001790154.1 hypothetical protein -
  ACCK21_RS09970 (ACCK21_09970) traP 2016035..2016538 (+) 504 WP_000737976.1 signal transduction protein TRAP -
  ACCK21_RS09975 (ACCK21_09975) - 2016662..2017885 (-) 1224 WP_001245769.1 ABC transporter permease -
  ACCK21_RS09980 (ACCK21_09980) pptA 2017878..2018618 (-) 741 WP_000216878.1 ABC transporter ATP-binding protein Regulator
  ACCK21_RS09985 (ACCK21_09985) - 2018752..2019174 (+) 423 WP_000004981.1 HIT family protein -
  ACCK21_RS09990 (ACCK21_09990) - 2019316..2019681 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  ACCK21_RS09995 (ACCK21_09995) - 2020414..2020971 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  ACCK21_RS10000 (ACCK21_10000) - 2021176..2022138 (+) 963 WP_000782121.1 foldase protein PrsA -
  ACCK21_RS10005 (ACCK21_10005) yhaM 2022259..2023200 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27717.04 Da        Isoelectric Point: 4.6672

>NTDB_id=934283 ACCK21_RS09980 WP_000216878.1 2017878..2018618(-) (pptA) [Staphylococcus aureus strain CUBIST-25]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDETMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=934283 ACCK21_RS09980 WP_000216878.1 2017878..2018618(-) (pptA) [Staphylococcus aureus strain CUBIST-25]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAACGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAGTTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XJD3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545