Detailed information NTG0934105

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AB9M03_RS16095
• Genome accession: NZ_CP168035
• Coordinates: 3234447..3235472 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC23HZZ201
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3229447..3240472

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9M03_RS16065 (AB9M03_16070)	zapB	3229531..3229776 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AB9M03_RS16070 (AB9M03_16075)	rraA	3229861..3230346 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AB9M03_RS16075 (AB9M03_16080)	menA	3230439..3231365 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AB9M03_RS16080 (AB9M03_16085)	hslU	3231432..3232763 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AB9M03_RS16085 (AB9M03_16090)	hslV	3232773..3233303 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AB9M03_RS16090 (AB9M03_16095)	ftsN	3233396..3234355 (-)	960	WP_000068828.1	cell division protein FtsN	-
AB9M03_RS16095 (AB9M03_16100)	cytR	3234447..3235472 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AB9M03_RS16100 (AB9M03_16105)	priA	3235628..3237826 (-)	2199	WP_188003408.1	primosomal protein N'	Machinery gene
AB9M03_RS16105 (AB9M03_16110)	rpmE	3238029..3238241 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AB9M03_RS16110 (AB9M03_16115)	yiiX	3238302..3238910 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AB9M03_RS16115 (AB9M03_16120)	metJ	3239094..3239411 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=934105 AB9M03_RS16095 WP_000644904.1 3234447..3235472(-) (cytR) [Escherichia coli strain EC23HZZ201]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=934105 AB9M03_RS16095 WP_000644904.1 3234447..3235472(-) (cytR) [Escherichia coli strain EC23HZZ201]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628