Detailed information NTG0933392

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V3H91_RS18485
• Genome accession: NZ_CP144281
• Coordinates: 3616822..3617985 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SEC-024A
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3611822..3622985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3H91_RS18455	-	3612087..3612506 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
V3H91_RS18460	comFC	3612580..3613269 (-)	690	WP_196769287.1	phosphoribosyltransferase family protein	Machinery gene
V3H91_RS18465	-	3613275..3613559 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
V3H91_RS18470	comFA	3613617..3615002 (-)	1386	WP_043867470.1	DEAD/DEAH box helicase	Machinery gene
V3H91_RS18475	-	3615110..3615958 (-)	849	WP_003151387.1	DegV family protein	-
V3H91_RS18480	degU	3616056..3616745 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
V3H91_RS18485	degS	3616822..3617985 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
V3H91_RS18490	-	3618208..3618855 (+)	648	WP_003151384.1	YigZ family protein	-
V3H91_RS18495	-	3618860..3620074 (+)	1215	WP_107994213.1	LCP family protein	-
V3H91_RS18500	-	3620164..3621240 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
V3H91_RS18505	tuaH	3621373..3622569 (-)	1197	WP_003151381.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=933392 V3H91_RS18485 WP_003151385.1 3616822..3617985(-) (degS) [Bacillus velezensis strain SEC-024A]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=933392 V3H91_RS18485 WP_003151385.1 3616822..3617985(-) (degS) [Bacillus velezensis strain SEC-024A]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAGTCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948