Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   V3H91_RS07505 Genome accession   NZ_CP144281
Coordinates   1404791..1405255 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain SEC-024A     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1399791..1410255
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3H91_RS07485 - 1400271..1402091 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  V3H91_RS07490 - 1402067..1403286 (-) 1220 Protein_1417 aminotransferase A -
  V3H91_RS07495 - 1403487..1403648 (-) 162 WP_007409608.1 hypothetical protein -
  V3H91_RS07500 cheV 1403837..1404748 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  V3H91_RS07505 kre 1404791..1405255 (-) 465 WP_003154622.1 YkyB family protein Regulator
  V3H91_RS07510 - 1405378..1406670 (-) 1293 WP_107994416.1 MFS transporter -
  V3H91_RS07515 - 1406746..1407240 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  V3H91_RS07520 - 1407315..1408178 (-) 864 WP_003154619.1 metallophosphoesterase -
  V3H91_RS07525 fadH 1408322..1409086 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  V3H91_RS07530 - 1409197..1409742 (+) 546 Protein_1425 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=933354 V3H91_RS07505 WP_003154622.1 1404791..1405255(-) (kre) [Bacillus velezensis strain SEC-024A]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=933354 V3H91_RS07505 WP_003154622.1 1404791..1405255(-) (kre) [Bacillus velezensis strain SEC-024A]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGCTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929