Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | V3H79_RS06620 | Genome accession | NZ_CP144279 |
| Coordinates | 1322414..1324219 (+) | Length | 601 a.a. |
| NCBI ID | WP_006845241.1 | Uniprot ID | A0A7H1MN57 |
| Organism | Weissella koreensis strain DMW12 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1317414..1329219
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V3H79_RS06590 | - | 1318080..1318922 (+) | 843 | WP_006845235.1 | YitT family protein | - |
| V3H79_RS06595 | - | 1318971..1319720 (+) | 750 | WP_006845236.1 | DnaD domain protein | - |
| V3H79_RS06600 | - | 1319740..1320243 (+) | 504 | WP_006845237.1 | MscL family protein | - |
| V3H79_RS06605 | - | 1320289..1320432 (+) | 144 | WP_006845238.1 | hypothetical protein | - |
| V3H79_RS06610 | - | 1320496..1321215 (+) | 720 | WP_006845239.1 | adaptor protein MecA | - |
| V3H79_RS06615 | - | 1321324..1322394 (+) | 1071 | WP_331696417.1 | competence protein CoiA | - |
| V3H79_RS06620 | pepF | 1322414..1324219 (+) | 1806 | WP_006845241.1 | oligoendopeptidase F | Regulator |
| V3H79_RS06625 | glyQ | 1324569..1325495 (+) | 927 | WP_006845243.1 | glycine--tRNA ligase subunit alpha | - |
| V3H79_RS06630 | glyS | 1325497..1327569 (+) | 2073 | WP_331696348.1 | glycine--tRNA ligase subunit beta | - |
| V3H79_RS06635 | - | 1327763..1328194 (+) | 432 | WP_006845245.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| V3H79_RS06640 | - | 1328298..1328837 (+) | 540 | WP_006845246.1 | NADPH-dependent FMN reductase | - |
Sequence
Protein
Download Length: 601 a.a. Molecular weight: 68219.99 Da Isoelectric Point: 4.1831
>NTDB_id=933289 V3H79_RS06620 WP_006845241.1 1322414..1324219(+) (pepF) [Weissella koreensis strain DMW12]
MVKEIPIRSEVPTSQTWDLTTIFKDDQAFDAAVEDLNLRLELSDALAEKVSNSGQDLYQALQYGLSLMRDLEKVYVYASM
KSDQDTGNQYYQGLNAIAGNLAAQVSSAIAFFDPAVLSLSDQQLAEMFETEPRLKDYQHYFETILTQKGHVLSRESEELL
AGASEVFNASQNTFSILDNADMEFGAVENEDGEFEQLTNGVYSRLLESSNPTVRKNAFQTFYQSYAQLENTFGTLISGNV
KQQNFQAQVRNYQSAREAALAQNHIPEVVYDNLVETTHQALPLLHRYVALRKKMLKLPELHSYDLYTPILGTPDFDIDYE
SAKAMALEALKPMGDEYLSIMNDAFDERWIDVVENKGKRSGAYSGGSYDTNPFMLLNWVDNLNNLYTLVHEMGHSVHSYQ
TRNNQPYQYGDYPIFLAEIASTTNENLLTDYLLKTITDPQIRAYILNQYLDGFKGTMFRQTQFAEFEQWMHEKDASGVPL
TAEVLDDAYLDLNQEYYGPALTVDPEIAYEWARIPHFYYNFYVFQYSTGFAAATALAEQILHGGTEGVAAYMSYLQAGSS
DFPLEVIKKAGVDMAKTDYLQATFDVFEQRLNEFESIIDTL
MVKEIPIRSEVPTSQTWDLTTIFKDDQAFDAAVEDLNLRLELSDALAEKVSNSGQDLYQALQYGLSLMRDLEKVYVYASM
KSDQDTGNQYYQGLNAIAGNLAAQVSSAIAFFDPAVLSLSDQQLAEMFETEPRLKDYQHYFETILTQKGHVLSRESEELL
AGASEVFNASQNTFSILDNADMEFGAVENEDGEFEQLTNGVYSRLLESSNPTVRKNAFQTFYQSYAQLENTFGTLISGNV
KQQNFQAQVRNYQSAREAALAQNHIPEVVYDNLVETTHQALPLLHRYVALRKKMLKLPELHSYDLYTPILGTPDFDIDYE
SAKAMALEALKPMGDEYLSIMNDAFDERWIDVVENKGKRSGAYSGGSYDTNPFMLLNWVDNLNNLYTLVHEMGHSVHSYQ
TRNNQPYQYGDYPIFLAEIASTTNENLLTDYLLKTITDPQIRAYILNQYLDGFKGTMFRQTQFAEFEQWMHEKDASGVPL
TAEVLDDAYLDLNQEYYGPALTVDPEIAYEWARIPHFYYNFYVFQYSTGFAAATALAEQILHGGTEGVAAYMSYLQAGSS
DFPLEVIKKAGVDMAKTDYLQATFDVFEQRLNEFESIIDTL
Nucleotide
Download Length: 1806 bp
>NTDB_id=933289 V3H79_RS06620 WP_006845241.1 1322414..1324219(+) (pepF) [Weissella koreensis strain DMW12]
ATGGTAAAAGAAATTCCAATCCGTTCAGAAGTGCCTACAAGCCAAACTTGGGACTTAACAACGATTTTTAAAGATGATCA
AGCTTTTGACGCTGCTGTTGAAGATTTGAATCTACGACTTGAATTATCAGATGCTTTGGCTGAAAAGGTGTCTAATTCTG
GTCAAGATTTATATCAAGCTCTACAATATGGTTTAAGCTTGATGCGTGATTTAGAAAAAGTATATGTGTATGCATCAATG
AAGTCTGATCAAGATACTGGTAATCAATATTATCAAGGCTTAAATGCAATTGCTGGAAATTTAGCGGCACAAGTATCAAG
TGCAATTGCCTTCTTTGATCCAGCAGTATTAAGTCTTTCGGATCAACAATTAGCTGAAATGTTTGAGACTGAGCCTAGAT
TAAAGGACTATCAACATTATTTTGAAACGATTCTAACGCAAAAAGGGCATGTTCTATCACGGGAAAGCGAAGAACTTTTG
GCTGGGGCTTCTGAAGTCTTTAATGCTTCGCAAAATACATTTAGTATTTTAGATAATGCGGATATGGAATTTGGAGCAGT
TGAAAATGAAGATGGTGAATTCGAACAATTGACGAATGGTGTTTATAGCCGCTTGTTAGAGTCGTCTAATCCAACAGTCC
GTAAAAATGCTTTTCAAACTTTCTATCAATCTTATGCGCAATTAGAGAATACGTTTGGAACACTTATTAGTGGAAATGTT
AAACAACAAAATTTTCAAGCGCAAGTTCGAAACTATCAATCAGCTCGTGAAGCGGCCTTGGCACAAAATCATATTCCAGA
AGTTGTTTATGATAATTTGGTTGAAACTACACATCAAGCCTTACCTCTGTTACATCGTTATGTAGCACTTCGTAAAAAAA
TGTTGAAGTTACCTGAATTACATTCATATGATTTGTATACACCTATTTTAGGAACACCTGATTTTGATATCGACTATGAA
TCAGCTAAGGCGATGGCTTTGGAAGCTCTGAAGCCTATGGGTGATGAATATCTATCAATTATGAATGATGCCTTTGATGA
ACGTTGGATTGACGTTGTTGAAAATAAAGGGAAACGTAGTGGAGCATATTCGGGAGGATCGTATGATACCAATCCCTTCA
TGCTATTAAATTGGGTGGATAATTTAAATAATTTGTACACCCTGGTTCATGAAATGGGACATTCGGTTCATAGTTATCAA
ACTCGAAATAATCAGCCTTATCAATATGGAGATTACCCAATCTTTTTAGCTGAGATCGCTTCAACTACCAATGAGAATCT
ATTAACTGATTATTTGTTAAAGACAATTACGGATCCACAAATTCGAGCTTATATCTTGAATCAATACCTAGATGGATTCA
AGGGAACTATGTTTAGGCAAACTCAATTTGCTGAATTTGAGCAATGGATGCACGAAAAGGATGCAAGCGGGGTACCTTTA
ACGGCAGAAGTTCTTGATGATGCGTATCTGGATTTGAATCAAGAATATTATGGTCCAGCGTTGACCGTTGATCCAGAAAT
TGCATATGAGTGGGCTCGTATTCCACACTTCTATTACAATTTCTATGTATTTCAATATTCGACTGGCTTCGCTGCAGCGA
CGGCCTTAGCAGAGCAAATTTTGCATGGAGGAACTGAAGGAGTGGCTGCTTATATGAGCTATCTACAAGCTGGTTCATCA
GATTTTCCATTGGAAGTTATTAAAAAAGCTGGCGTTGATATGGCTAAAACGGATTATTTACAAGCAACCTTTGACGTCTT
TGAACAACGTCTAAATGAATTTGAATCTATTATTGATACGCTTTAA
ATGGTAAAAGAAATTCCAATCCGTTCAGAAGTGCCTACAAGCCAAACTTGGGACTTAACAACGATTTTTAAAGATGATCA
AGCTTTTGACGCTGCTGTTGAAGATTTGAATCTACGACTTGAATTATCAGATGCTTTGGCTGAAAAGGTGTCTAATTCTG
GTCAAGATTTATATCAAGCTCTACAATATGGTTTAAGCTTGATGCGTGATTTAGAAAAAGTATATGTGTATGCATCAATG
AAGTCTGATCAAGATACTGGTAATCAATATTATCAAGGCTTAAATGCAATTGCTGGAAATTTAGCGGCACAAGTATCAAG
TGCAATTGCCTTCTTTGATCCAGCAGTATTAAGTCTTTCGGATCAACAATTAGCTGAAATGTTTGAGACTGAGCCTAGAT
TAAAGGACTATCAACATTATTTTGAAACGATTCTAACGCAAAAAGGGCATGTTCTATCACGGGAAAGCGAAGAACTTTTG
GCTGGGGCTTCTGAAGTCTTTAATGCTTCGCAAAATACATTTAGTATTTTAGATAATGCGGATATGGAATTTGGAGCAGT
TGAAAATGAAGATGGTGAATTCGAACAATTGACGAATGGTGTTTATAGCCGCTTGTTAGAGTCGTCTAATCCAACAGTCC
GTAAAAATGCTTTTCAAACTTTCTATCAATCTTATGCGCAATTAGAGAATACGTTTGGAACACTTATTAGTGGAAATGTT
AAACAACAAAATTTTCAAGCGCAAGTTCGAAACTATCAATCAGCTCGTGAAGCGGCCTTGGCACAAAATCATATTCCAGA
AGTTGTTTATGATAATTTGGTTGAAACTACACATCAAGCCTTACCTCTGTTACATCGTTATGTAGCACTTCGTAAAAAAA
TGTTGAAGTTACCTGAATTACATTCATATGATTTGTATACACCTATTTTAGGAACACCTGATTTTGATATCGACTATGAA
TCAGCTAAGGCGATGGCTTTGGAAGCTCTGAAGCCTATGGGTGATGAATATCTATCAATTATGAATGATGCCTTTGATGA
ACGTTGGATTGACGTTGTTGAAAATAAAGGGAAACGTAGTGGAGCATATTCGGGAGGATCGTATGATACCAATCCCTTCA
TGCTATTAAATTGGGTGGATAATTTAAATAATTTGTACACCCTGGTTCATGAAATGGGACATTCGGTTCATAGTTATCAA
ACTCGAAATAATCAGCCTTATCAATATGGAGATTACCCAATCTTTTTAGCTGAGATCGCTTCAACTACCAATGAGAATCT
ATTAACTGATTATTTGTTAAAGACAATTACGGATCCACAAATTCGAGCTTATATCTTGAATCAATACCTAGATGGATTCA
AGGGAACTATGTTTAGGCAAACTCAATTTGCTGAATTTGAGCAATGGATGCACGAAAAGGATGCAAGCGGGGTACCTTTA
ACGGCAGAAGTTCTTGATGATGCGTATCTGGATTTGAATCAAGAATATTATGGTCCAGCGTTGACCGTTGATCCAGAAAT
TGCATATGAGTGGGCTCGTATTCCACACTTCTATTACAATTTCTATGTATTTCAATATTCGACTGGCTTCGCTGCAGCGA
CGGCCTTAGCAGAGCAAATTTTGCATGGAGGAACTGAAGGAGTGGCTGCTTATATGAGCTATCTACAAGCTGGTTCATCA
GATTTTCCATTGGAAGTTATTAAAAAAGCTGGCGTTGATATGGCTAAAACGGATTATTTACAAGCAACCTTTGACGTCTT
TGAACAACGTCTAAATGAATTTGAATCTATTATTGATACGCTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
54.899 |
98.502 |
0.541 |