Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   VY732_RS27815 Genome accession   NZ_CP144274
Coordinates   6255993..6256397 (-) Length   134 a.a.
NCBI ID   WP_007913673.1    Uniprot ID   -
Organism   Pseudomonas sp. ZY71     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6250993..6261397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VY732_RS27800 (VY732_27800) - 6252824..6254872 (-) 2049 WP_093429842.1 methyl-accepting chemotaxis protein -
  VY732_RS27805 (VY732_27805) - 6255017..6255556 (-) 540 WP_007913675.1 chemotaxis protein CheW -
  VY732_RS27810 (VY732_27810) pilH 6255567..6255932 (-) 366 WP_007913674.1 twitching motility response regulator PilH -
  VY732_RS27815 (VY732_27815) pilG 6255993..6256397 (-) 405 WP_007913673.1 twitching motility response regulator PilG Regulator
  VY732_RS27820 (VY732_27820) gshB 6256623..6257594 (+) 972 WP_123593602.1 glutathione synthase -
  VY732_RS27825 (VY732_27825) - 6257702..6258601 (+) 900 WP_038358807.1 energy transducer TonB -
  VY732_RS27830 (VY732_27830) - 6258773..6259345 (+) 573 WP_016985971.1 YqgE/AlgH family protein -
  VY732_RS27835 (VY732_27835) ruvX 6259345..6259782 (+) 438 WP_007913667.1 Holliday junction resolvase RuvX -
  VY732_RS27840 (VY732_27840) pyrR 6259863..6260369 (+) 507 WP_064116261.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=933243 VY732_RS27815 WP_007913673.1 6255993..6256397(-) (pilG) [Pseudomonas sp. ZY71]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=933243 VY732_RS27815 WP_007913673.1 6255993..6256397(-) (pilG) [Pseudomonas sp. ZY71]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACTGCCGAAACATTATT
GAAGAATGTCGGCTGCGAAGTGATCACGGCGATCGACGGTTTCGATGCGTTGGCAAAGATCGCCGACAACCATCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGCGCGTTCAAA
GCCACGCCGGTGATCATGCTGTCATCGCGTGACGGACTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCGATCCAGGCCCACGTACCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701